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help > RE: how to employ func.gii to perform surface-based FC analysis?
Feb 3, 2021 04:02 PM | Alfonso Nieto-Castanon - Boston University
RE: how to employ func.gii to perform surface-based FC analysis?
Hi Julian,
Would it be possible in your context to run fmriprep using the flag "--output-space fsaverage" instead of "--output-space fsaverage5" to create the files in the appropriate resolution? (fsaverage5 has only 10,242 vertices per hemisphere, while fsaverage has 163,842, so resampling-up from fsaverage5 to fsaverage is not ideal)
Best
Alfonso
Originally posted by Julian Dronse:
Would it be possible in your context to run fmriprep using the flag "--output-space fsaverage" instead of "--output-space fsaverage5" to create the files in the appropriate resolution? (fsaverage5 has only 10,242 vertices per hemisphere, while fsaverage has 163,842, so resampling-up from fsaverage5 to fsaverage is not ideal)
Best
Alfonso
Originally posted by Julian Dronse:
Thanks Alfonso for your quick response!
FMRIPREP outputs fsaverage5 space functional data, so not the same resolution as CONN.
I attached two hemisphere files as an example.
If there was a way to import these, that would be great!
Best wishes
Julian
FMRIPREP outputs fsaverage5 space functional data, so not the same resolution as CONN.
I attached two hemisphere files as an example.
If there was a way to import these, that would be great!
Best wishes
Julian
Threaded View
| Title | Author | Date |
|---|---|---|
| Li He | Jan 11, 2020 | |
| Julian Dronse | Feb 1, 2021 | |
| Alfonso Nieto-Castanon | Feb 2, 2021 | |
| Julian Dronse | Feb 3, 2021 | |
| Alex Kapadia | Feb 24, 2023 | |
| Alfonso Nieto-Castanon | Feb 3, 2021 | |
| Julian Dronse | Feb 3, 2021 | |