help
help > RE: CONN denoise output
Feb 9, 2021 04:02 AM | Lorenzo Pasquini - Klinikum rechts der Isar Technische Universitaet Muenchen
RE: CONN denoise output
Dear Alfonso
apologies for multiple postings and thanks against for the clear response.
Sorry, one more question.
In the following module, scrubbing regression and detrending are performed, but no regression of rest (I counted 24 regressors with the intercept).
functional bandpass needs to come before regression as logical precondition to perform simult filtering
conn_module( 'preprocessing', ...
'structurals', {'/Volumes/My_Book/test/anat.nii'}, ...
'functionals', {'/Volumes/My_Book/test/f.nii'}, ...
'steps', {'default_mni', 'functional_bandpass','functional_regression'}, ...
'sliceorder', 'ascending', ...
'fwhm', 6, ...
'reg_names', {'realignment','scrubbing','White Matter','CSF'}, ...
'reg_dimensions',[inf, inf, 5, 5], ...
'reg_deriv', [1, 0, 0, 0], ...
'bp_filter', [0.008 0.09],...
'reg_filter', [1 0 1 1])
Thanks again for your help
Lorenzo
apologies for multiple postings and thanks against for the clear response.
Sorry, one more question.
In the following module, scrubbing regression and detrending are performed, but no regression of rest (I counted 24 regressors with the intercept).
functional bandpass needs to come before regression as logical precondition to perform simult filtering
conn_module( 'preprocessing', ...
'structurals', {'/Volumes/My_Book/test/anat.nii'}, ...
'functionals', {'/Volumes/My_Book/test/f.nii'}, ...
'steps', {'default_mni', 'functional_bandpass','functional_regression'}, ...
'sliceorder', 'ascending', ...
'fwhm', 6, ...
'reg_names', {'realignment','scrubbing','White Matter','CSF'}, ...
'reg_dimensions',[inf, inf, 5, 5], ...
'reg_deriv', [1, 0, 0, 0], ...
'bp_filter', [0.008 0.09],...
'reg_filter', [1 0 1 1])
Thanks again for your help
Lorenzo
Threaded View
| Title | Author | Date |
|---|---|---|
| Lorenzo Pasquini | Feb 9, 2021 | |
| Alfonso Nieto-Castanon | Feb 9, 2021 | |
| Lorenzo Pasquini | Feb 9, 2021 | |