help > RE: How to write design matrix and contrast for continuous variable analysis (not comparison between groups)
Aug 31, 2021  05:08 PM | Ben Sipes - University of California, San Francisco
RE: How to write design matrix and contrast for continuous variable analysis (not comparison between groups)
Hi all,

@Andrew, thank you for contribution to NBS and answering questions on this forum!! 

I have some follow-up questions to this thread to help me better understand the design matrix and contrast construction for continuous variables.

Let's say I have connectome data from N subjects as well as behavioral data from each subject as a continuous variable, then I want to ask whether there is some connected subgraph with edge strengths that linearly increase with the behavioral measure across subjects.

As I understand it, I should create an Nx2 design matrix, where the first column is a constant [ones(N,1)], and the second column is the demeaned continuous behavioral measure. Then the contrast vector would be [0 1] to find a linearly increasing connected subgraph (via NBS), and the statistical test would be "t-test." Conversely, if the question asked about a linearly decreasing subgraph, then the contrast vector would instead be [0 -1]. Is this baseline intuition correct?

Next, I would like to ask the same question, but control for two covariates, age and sex. I believe I should then have an Nx4 design matrix, with a constant (first column), demeaned behavioral measure (second column), and demeaned age and demeaned sex (third and fourth columns, respectively). Then would the associated contrast vector be [0 1 0 0]? Or would it instead be [0 1 1 1]? Are there valid but different interpretations for both of these contrasts? Is the appropriate statistical test still "t-test?"

Thank you so much for your help with this question!

--Ben

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TitleAuthorDate
Qiushi Wang Jul 20, 2021
RE: How to write design matrix and contrast for continuous variable analysis (not comparison between groups)
Ben Sipes Aug 31, 2021
Andrew Zalesky Sep 1, 2021
Ben Sipes Sep 1, 2021
Andrew Zalesky Jul 20, 2021
Qiushi Wang Jul 21, 2021