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help > CONN toolbox denoising step in preprocessing
Apr 8, 2023 05:04 PM | Lei Cao
CONN toolbox denoising step in preprocessing
Hi CONN experts,
I was trying to use CONN toolbox to denoise my data. And here is the code I use:
conn_module('preprocessing',...
'functionals', {funcdata}, ...
'covariates', struct(...
'names', {{'nuisance'}},...
'files', {{nuisance}}),...
'steps', {'functional_regression'}, ...
'reg_names', {'nuisance'}, ...
'reg_dimensions',[inf], ...
'reg_deriv', [0], ...
'reg_detrend', [1])
And in the standard output I get:
CONN: RUNNING SETUP.PREPROCESSING STEP
Preparing functional Regression of temporal components (keep residuals of linear model to BOLD timeseries). Please wait...
regression of temporal component (nuisance )
dimensions = Inf; derivatives = 0; filtered = []; lags(0-8s) = []; skip = 0; detrend = 1
Performing functional Regression of temporal components (keep residuals of linear model to BOLD timeseries). Please wait...
Done functional Regression of temporal components (keep residuals of linear model to BOLD timeseries)
Importing results to CONN project. Please wait...
Done
ans =
[]
Is there a way to avoid it writing to a CONN project which I do not have in this case?
Thanks a lot for your help,
Lei
I was trying to use CONN toolbox to denoise my data. And here is the code I use:
conn_module('preprocessing',...
'functionals', {funcdata}, ...
'covariates', struct(...
'names', {{'nuisance'}},...
'files', {{nuisance}}),...
'steps', {'functional_regression'}, ...
'reg_names', {'nuisance'}, ...
'reg_dimensions',[inf], ...
'reg_deriv', [0], ...
'reg_detrend', [1])
And in the standard output I get:
CONN: RUNNING SETUP.PREPROCESSING STEP
Preparing functional Regression of temporal components (keep residuals of linear model to BOLD timeseries). Please wait...
regression of temporal component (nuisance )
dimensions = Inf; derivatives = 0; filtered = []; lags(0-8s) = []; skip = 0; detrend = 1
Performing functional Regression of temporal components (keep residuals of linear model to BOLD timeseries). Please wait...
Done functional Regression of temporal components (keep residuals of linear model to BOLD timeseries)
Importing results to CONN project. Please wait...
Done
ans =
[]
Is there a way to avoid it writing to a CONN project which I do not have in this case?
Thanks a lot for your help,
Lei
Threaded View
| Title | Author | Date |
|---|---|---|
| Lei Cao | Apr 8, 2023 | |
| Alfonso Nieto-Castanon | Apr 13, 2023 | |
