help > CONN toolbox: Changing ART detection tools
Jun 20, 2023  02:06 PM | lammersf - Charité-Universitätsmedizin Berlin
CONN toolbox: Changing ART detection tools

Dear all,


I've run the CONN default preprocessing pipeline with conservative settings for outlier detection. However, I would like to change the settings to the intermediate level. I considered the "apply individual preprocessing step" a potential way to repeat the outlier identification step without running the whole default preprocessing pipeline all over again.


To my experience, CONN will always take the most recently generated files to proceed with, which would be  the swau*-files after completion of the whole default preprocessing pipeline. Accordingly, I now have two sets of files called art_regression_outliers_swau* and art_regression_outliers_au*, suggesting that CONN has taken two different input files from different preprocessing stages. However, the ART results look identical at first glance, except for the number of identified outliers.


So, does it matter if I take the *au- or *swau-files as an input for ART? And even more interesting, is there a way to tell CONN it should use the *au-files instead of the *swau files without going back to the project set-up and importing the *au-files?


Thanks in advance,


Florian

Attachment: compare_results.png

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TitleAuthorDate
CONN toolbox: Changing ART detection tools
lammersf Jun 20, 2023
Alfonso Nieto-Castanon Jul 5, 2023