Hi,

I ran into the same issue a few days ago (see: https://www.nitrc.org/forum/forum.php?thread_id=15985&forum_id=1144 )

I’m still having trouble fully understanding it and haven’t found a solution yet. In the meantime, could you let me know whether you were able to complete the analysis? If so, did you try overlaying the denoised functional image (dswau*.nii) onto the anatomical image (wc0c*.nii)? In my case, they never align (see Figure 1). Interestingly, the smoothed but non-denoised images (swau*.nii) consistently align perfectly with the anatomical image (see Figure 2).

FIGURE 1:

FIGURE 2:

Kind regards,

Adrian.