BRAINSFit

NOTE: All active development of BRAINSFit is now being stored in a Git repository at github.com. Please go to

https://github.com/BRAINSia/BRAINSTools

A program for registering images with with mutual information based metric. Several registration options are given for 3,6, 9,12,16 parameter (i.e. translate, rigid, scale, scale/skew, full affine) based constraints for the registration. The program uses the Slicer3 execution model framework to define the command line arguments and can be fully integrated with Slicer3 using the module discovery capabilities of Slicer3

Specifications

Category:Intermodal, Intersubject, Affine Warp, Linear Warp
License:BSD License
Development Status:5 - Production/Stable/Mature
Diagnosis:Brain Injuries
Domain:MR
Environment:Console (Text Based)
Intended Audience:Developers, End Users, Other Audience
Natural Language:English
Operating System:MacOS, Windows, OS Independent, POSIX/UNIX-like
Programming Language:C++
Supported Data Format:ANALYZE, DICOM, NIfTI-1, Other Format

Associations

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is required to run:

Recent Activity

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Document Activity

PubMed Mentions documentation

Atlas-guided segmentation of vervet monkey brain MRI. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Mapping connectivity damage in the case of Phineas Gage. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Automated parcellation of the brain surface generated from magnetic resonance images. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Resection probability maps for quality assessment of glioma surgery without brain location bias. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Individual differences in transcranial electrical stimulation current density. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

UNC-Utah NA-MIC framework for DTI fiber tract analysis. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Rapid and efficient localization of depth electrodes and cortical labeling using free and open source medical software in epilepsy surgery candidates. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

The Insight ToolKit image registration framework. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Multi-atlas segmentation of subcortical brain structures via the AutoSeg software pipeline. posted by Nina Preuss on Dec 16, 2017

Document Activity

Main Folder documentation

BRAINSFit: Mutual Information Rigid Registration of Whole-Brain 3D Images Using the Insight Toolkit posted by kent williams on Aug 21, 2009