Hi Jae,
the software needs to know the location of all nodes in order to generate a network visualization. Without node locations, it does not know where to place nodes.
A function is avaible in the package to compute node centres from a parcellation.
Alternatively, you can use the matrix of signficiant connections without forming a visualization. Type "global nbs" in the command window after running the software. This will give you access to a structure called nbs, which stores the relevant results.
Andrew
Originally posted by Jae Young Park:
Thank you so much for your help. After going through your suggestions, I was able to run the analysis.
Following my previous analysis, I am now running a linear regression analysis on my structural connectivity data and would like to verify my design file. I used the following two contrasts: [0 1 0 0] and [0 -1 0 0] and my design file was structured like the following.
Example:
[Intercepts, predictor variable, covariate 1, covariate 2]
[1, 45, 0.6, -10.18]
[1, 67, 7.8, 6.82]
[1, 32, 8.3, -0.18]
In addition, I was wondering whether there is a way to open the results without providing the Node Coordinates (MNI) and Node Labels files. I was able to obtain a significant result, but at the moment I do not have the corresponding Node Coordinates, so I am unable to see which node was found to be significant.
Thank you again for your help and have a great weekend.
Threaded View
| Title | Author | Date |
|---|---|---|
| Jae Young Park | Jun 29, 2026 | |
| Andrew Zalesky | Jun 29, 2026 | |
| Jae Young Park | Jul 3, 2026 | |
| Andrew Zalesky | 16 hours ago | |
| Jae Young Park | Jul 3, 2026 | |
