Dear Alfonso and CONN experts,

I'm running into this same issue in CONN v.17. Here is the specific error message I receive when I run my conn batch:

Error using conn_process (line 610)
No suprathreshold voxels in ROI file /nfs/popasd/CoCoA/RiSE/fsl_analysis/fD_0343/anatomy/wc1cbrain.nii (this typically indicates a problem during normalization/segmentation for this subject; please try re-running normalization/segmentation step after manually re-aligning the structural volumes to better match the default template orientation)

Based on this thread, I checked the coregistration for the anatomical volume which looks nice (attached), as well as the grey matter image itself (also attached). My guess is that there is something wrong with the tissue segmentation, and I'm wondering if there are any suggested workarounds for this issue?

Any advice much appreciated!

Cheers,
Jeremy