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users > RE: No reformatted files produced from Fiji/CMTK registration
Jun 29, 2019 10:06 PM | Greg Jefferis
RE: No reformatted files produced from Fiji/CMTK registration
Hi Zane,
I suggest you zip up a whole directory and share offline and I'll try to take a look on Mon.
> I've selected only to reformat channel 01, run the command, and still only get the Registration directory as an output.
Is there anything in your Registration directory? Perhaps it is failing at an earlier stage.
> Should I expect a Reformat directory, as in the classic gui?
Yes.
> Also, are there equivalent commands to e.g. "--class-ref label", "dof2mat", or "reformatx" in the gui, or is that functionality not supported here?
You can add extra arguments to be passed straight on to the underlying tools within the gui.
Best,
Greg.
I suggest you zip up a whole directory and share offline and I'll try to take a look on Mon.
> I've selected only to reformat channel 01, run the command, and still only get the Registration directory as an output.
Is there anything in your Registration directory? Perhaps it is failing at an earlier stage.
> Should I expect a Reformat directory, as in the classic gui?
Yes.
> Also, are there equivalent commands to e.g. "--class-ref label", "dof2mat", or "reformatx" in the gui, or is that functionality not supported here?
You can add extra arguments to be passed straight on to the underlying tools within the gui.
Best,
Greg.
Threaded View
Title | Author | Date |
---|---|---|
Zane Aldworth | Jun 28, 2019 | |
Greg Jefferis | Jun 28, 2019 | |
Zane Aldworth | Jun 28, 2019 | |
Greg Jefferis | Jun 29, 2019 | |
Zane Aldworth | Jun 30, 2019 | |
Greg Jefferis | Jun 30, 2019 | |
Jonathan Perdomo | Dec 17, 2020 | |
Greg Jefferis | Dec 17, 2020 | |
Jonathan Perdomo | Dec 18, 2020 | |