NITRC: CONN : functional connectivity toolbox: RE: using ART with slice timing corrected files

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RE: using ART with slice timing corrected files

Hi Melanie,
it should be something along the lines of:
batch.Setup.preprocessing.steps='functional_removescans';
batch.Setup.preprocessing.removescans=4;
Best
Alfonso
Originally posted by Melanie Morrison:

Hi Alfonso,

I'm using batch scripting and entered my functional volumes as such:
batch.Setup.functionals{1}{1}='/pathToData/Raw/fmri_001.nii';

If I want to remove the first 4 volumes in the preprocessing step, can I do something like "batch.Setup.removevolumes = 4"? Do you know what the correct syntax is?

Thanks,
Melanie

Threaded View

Title	Author	Date
using ART with slice timing corrected files	Catherine Hubbard	Sep 10, 2015

RE: using ART with slice timing corrected files	Alfonso Nieto-Castanon	Sep 14, 2015

RE: using ART with slice timing corrected files	Melanie Morrison	Feb 5, 2020

RE: using ART with slice timing corrected files	Alfonso Nieto-Castanon	Feb 5, 2020
RE: using ART with slice timing corrected files	Catherine Hubbard	Sep 16, 2015

RE: using ART with slice timing corrected files	Alfonso Nieto-Castanon	Sep 18, 2015

RE: using ART with slice timing corrected files	Catherine Hubbard	Sep 18, 2015

RE: using ART with slice timing corrected files	Catherine Hubbard	Sep 18, 2015

RE: using ART with slice timing corrected files	Alfonso Nieto-Castanon	Sep 26, 2015