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help > contents of PEAKS.mat file
Jul 15, 2020 11:07 PM | Kathleen Hupfeld - University of Florida
contents of PEAKS.mat file
Hi- in Conn seed-to-voxel analysis, when I press 'export mask' for
a certain threshold, one of the files created is *PEAKS.mat. I was
wondering more specifically what these peaks represent?
E.g., with a seed in 'vestibular cortex,' I get 529 peaks, 239 of which remain if I keep only those where 'peaks_suprathreshold' = 1.
Do these peaks represent local maxima? If so, is there any criteria regarding a min distance between peaks or is there a min cluster size for defining a cluster in which a peak is calculated?
I am confused as to how to interpret, because (as far as I can find), the *PEAKS.mat data do not map onto anything else I can see in the Results Explorer.
Ultimately, because my seed-to-voxel analysis has returned few very large clusters, I would like to use coordinates of local maxima to make ROIs for future ROI-to-ROI analyses.
Any help is greatly appreciated.
Best wishes,
Kathleen
E.g., with a seed in 'vestibular cortex,' I get 529 peaks, 239 of which remain if I keep only those where 'peaks_suprathreshold' = 1.
Do these peaks represent local maxima? If so, is there any criteria regarding a min distance between peaks or is there a min cluster size for defining a cluster in which a peak is calculated?
I am confused as to how to interpret, because (as far as I can find), the *PEAKS.mat data do not map onto anything else I can see in the Results Explorer.
Ultimately, because my seed-to-voxel analysis has returned few very large clusters, I would like to use coordinates of local maxima to make ROIs for future ROI-to-ROI analyses.
Any help is greatly appreciated.
Best wishes,
Kathleen
Threaded View
| Title | Author | Date |
|---|---|---|
| Kathleen Hupfeld | Jul 15, 2020 | |
| Tamir Eisenstein | Feb 10, 2021 | |
| Alfonso Nieto-Castanon | Feb 12, 2021 | |
| Tamir Eisenstein | Feb 6, 2021 | |
| Tamir Eisenstein | Feb 5, 2021 | |
| Alfonso Nieto-Castanon | Feb 5, 2021 | |
| Tamir Eisenstein | Feb 4, 2021 | |
