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help > CONN batch scripting: How to skip already-done things?
Apr 15, 2021 05:04 PM | Karl Lerud
CONN batch scripting: How to skip already-done things?
Hi Alfonso et al. I am working on using a script to maintain a
fairly large CONN project, using v 20b. I only have one
preprocessing step specified:
Setup.preprocessing.steps={'functional_art'}; (functional data is
otherwise already preprocessed). The processing got pretty far, but
errored out because of a small mistake in my Results second-level
specifications. I fixed this (I think) and switched Setup.isnew,
Setup.overwrite, and Denoising.overwrite to 0 thinking that it
would skip the preprocessing etc. that it already did and move
right to the Analysis and results, but it appears to be starting
over and doing all that again. What is the correct way to skip the
things it already did? Should I also set Setup.done and
Denoising.done to 0? Also if I add just one or two new subjects, I
want it to start at the beginning for only the new subjects. I seem
to remember in the GUI this worked pretty intuitively with a
pull-down that just said "Do not overwrite already-processed
subjects/ROIs" or something to that effect. Thanks,
Karl
Karl
Threaded View
| Title | Author | Date |
|---|---|---|
| Karl Lerud | Apr 15, 2021 | |
| Karl Lerud | Apr 27, 2021 | |
| Alfonso Nieto-Castanon | May 3, 2021 | |
| Karl Lerud | May 12, 2021 | |
| Alfonso Nieto-Castanon | May 12, 2021 | |
| Karl Lerud | Nov 10, 2021 | |
| Alfonso Nieto-Castanon | Nov 11, 2021 | |
| vaishali | Apr 22, 2025 | |
| Karl Lerud | Nov 11, 2021 | |
