help > Cluster computing - SLURM jobmanager test fails
Apr 28, 2021  08:04 PM | Amy Hegarty - University of Colorado - Boulder
Cluster computing - SLURM jobmanager test fails
Hello!!

I am new to CONN and trying to integrate it with my computing cluster - SLURM. I have added the configuration settings for my cluster computing; however, when I go to test the configuration it hangs indefinitely.

The test does run successfully under the following scenarios:
  1. submit sbatch command from terminal with generated shell script $ sbatch .qlog/210427151716257/node.0001210427151716257.sh
  2. in matlab: conn_jobmanager('rexec','.qlog/210427151716257/node.0001210427151716257.mat')
  3. in matlab: system('sbatch .qlog/210427151716257/node.0001210427151716257.sh')

So its perplexing as I understand the 'con jobmanager test' command and / or the test profile button in the gui under HCP Option >> Configuration both in essence execute option 3 above. 

Any ideas why the embedded test does not work while these other intermediate checks do?

Thanks
Amy

Threaded View

TitleAuthorDate
Cluster computing - SLURM jobmanager test fails
Amy Hegarty Apr 28, 2021
Alfonso Nieto-Castanon May 3, 2021
Amy Hegarty May 4, 2021
Alfonso Nieto-Castanon May 4, 2021
Amy Hegarty May 6, 2021
Alfonso Nieto-Castanon May 6, 2021
Amy Hegarty May 7, 2021