help
help > Covariate realignment mismatched dimension problem - after adding ROI
Jun 7, 2025 11:06 PM | Jeff Browndyke
Covariate realignment mismatched dimension problem - after adding ROI
After running a new model in an existing project analysis
file, I extracted the results as an ROI and then added this ROI
back into the CONN processing pipeline with the command to ignore
existing ROIs (to save processing time). I keep on running
into this brick wall error, despite re-running the whole
pre-processing pipeline on the 'original data,' which truncated
into this error again. The error iteratively cycles through
the majority of the subjects' data from what I can tell. Same
matrix dimension change error.
Any thoughts on a fix, other than just creating a brand new
project file?
Thanks & Warm Regards - Vive la Science!
Jeff
SPM12: spm_results_ui (v7388)
19:22:23 -
07/06/2025
========================================================================
SPM computation
:
...done
Unrecognized field name "I".
Error in spm_DesRep>cb_menu (line 1568)
SPM.xX.I,SPM.xC,SPM.xX.sF,SPM.xsDes);
Error while evaluating Menu Callback.
Ready to run Setup pipeline
do not overwrite (skip already-processed
subjects/ROIs)
steps : [0 1 1 1]
local processing (run on this
computer)
CONN: RUNNING SETUP STEP
Step 1/7: Checking data completeness
spm @ /Applications/Neuroimaging/functional/spm12
conn @ /Applications/Neuroimaging/functional/conn
SOME ERRORS FOUND!: Please revise the Setup information
ERROR DESCRIPTION:
ERROR: Subject 1 Session 1 first-level covariate realignment
mismatched dimensions (253 rows, while
functional data has 255 scans; the number of rows of a
first-level covariate should equal the number of scans for
this
subject/session)
Threaded View
Title | Author | Date |
---|---|---|
Jeff Browndyke | Jun 7, 2025 | |
Alfonso Nieto-Castanon | Jun 10, 2025 | |