|Priority: more information
Colin Shea (sheacd)
|Assigned To: more information
|Summary: more information|
How to embed surface thickness from CRUISE output?
I'm trying to extract labeled surface statistics (primarily
thickness) from the CRUISE outputs. I've managed to apply the
labeling algorithm (Labeling via Multiple Atlas Registrations)
output to a surface using the "Volume Labels to Surface" module.
Now I would like to use the "Surface Label Statistics" module to
correlate thickness measurements with these labels. However, the
input for that module requires a "Surface(s) with Statistic" input
that I don't know how to generate.
In previous versions of the JIST/CRUISE package there was a module
called "Iso-Levels for Surface" that took as input an
iso-level image and a surface file and output an "Iso level
surface" that I could use as the "Surface(s) with Statistic" input.
However that module seems to have disappeared in current versions
of JIST and I can't find an equivalent module.
Date: 2013-03-11 02:36
Sender: Colin Shea
Hey Min, thanks for the response. We're using the
TOADS-CRUISE_2012_Mar_23_R3c jar for JIST. The "Iso-Levels for
Surface" module is missing. We do have the Thickness v1.3R module,
which works for whole-surface measurements but we would really like
to also measure label-specific thickness.
Do you think it's just a matter of getting the class file for the
missing module? If so, where would I find it?
Date: 2013-03-09 23:00
Sender: Min Chen
Which version of JIST are you using? I still see a "Iso-Levels for
Surface" under IACL->Measurement->Surface. There's
also a module called "Thickness" in that folder. Is that
missing for you too?
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|New Message||2013-03-11 02:36||sheacd|
|New Message||2013-03-09 23:00||mchen55|