help > RE: ROI problem (csf)
Jun 14, 2016  03:06 PM | Alfonso Nieto-Castanon - Boston University
RE: ROI problem (csf)
Hi Bob,

If you are using the latest release (currently 16a) then the same 'e'-prepended file should be created in either case (when defining a erosion flag or when using only thresholding) containing the corresponding eroded and/or thresholded ROIs. Please let me know otherwise

Best
Alfonso
Originally posted by Bob Kraft:
I would like to verify the WM and CSF ROIs created when using the batch.Setup.cwthreshold.  When the erosion flags are set an "e" is appended to the masks. This allows me to easily check the masks created after erosion.   However, I am unable to find a similar file when just the threshold is set. 

How can I check the masks created if the erosion step is skipped?

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TitleAuthorDate
sherihane Bensemmane Nov 30, 2015
Alfonso Nieto-Castanon Nov 30, 2015
sherihane Bensemmane Dec 1, 2015
Alfonso Nieto-Castanon Dec 1, 2015
sherihane Bensemmane Dec 2, 2015
sherihane Bensemmane Dec 2, 2015
Alfonso Nieto-Castanon Dec 2, 2015
Jalmar Teeuw Dec 2, 2015
Alfonso Nieto-Castanon Dec 3, 2015
Jalmar Teeuw Feb 8, 2016
Alfonso Nieto-Castanon Feb 13, 2016
Jalmar Teeuw Feb 15, 2016
Alfonso Nieto-Castanon Feb 17, 2016
Bob Kraft Jun 14, 2016
RE: ROI problem (csf)
Alfonso Nieto-Castanon Jun 14, 2016
Bob Kraft Jun 22, 2016
Jalmar Teeuw Dec 4, 2015
sherihane Bensemmane Dec 3, 2015