Spatially Constrained Parcellation

Source code and parcellations now available! Go to http://ccraddock.github.io/cluster_roi/ for more information.

Spatially constrained parcellation is a set of tools for deriving ROI atlases by whole brain clustering of task or resting state data. In addition to the tools, this resource also contains several atlases derived by parcellating publicly available resting state fMRI datasets. The initial release will include python scripts and ROI atlases developed to perform the analyses described in Craddock et. al., A whole brain fMRI atlas generated via spatially constrained spectral clustering, which is currently in revision in Human Brain Mapping.

The scripts provide all of the tools necessary to derive an ROI atlases using spatially constrained Ncut spectral clustering. The scripts require python, numpy and scipy to run.
Download Now Download Now
OR See All Files

Specifications

License:Attribution Non-Commercial Share Alike
Diagnosis:Bipolar Disorder, Brain Injuries, Alzheimer Disease, Epilepsy, Parkinson Disease, Schizophrenia
Domain:MR

Associations


Recent Activity

Show: 
Document Activity

PubMed Mentions documentation

The effect of tapping finger and mode differences on cortical and subcortical activities: a PET study. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

On the use of superadditivity as a metric for characterizing multisensory integration in functional neuroimaging studies. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Simulating activations with cytoarchitecture. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Predicting the connectivity of primate cortical networks from topological and spatial node properties. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

The NeuARt II system: a viewing tool for neuroanatomical data based on published neuroanatomical atlases. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

MR diffusion tensor imaging: a window into white matter integrity of the working brain. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Fast reproducible identification and large-scale databasing of individual functional cognitive networks. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Cortical neurons combine visual cues about self-movement. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

MTHFR 677C>T effects on anterior cingulate structure and function during response monitoring in schizophrenia: a preliminary study. posted by Nina Preuss on Dec 16, 2017

Document Activity

PubMed Mentions documentation

Executive dysfunction in frontotemporal dementia is related to abnormalities in frontal white matter tracts. posted by Nina Preuss on Dec 16, 2017