BioImage Suite

BioImage Suite is a general purpose registration/segmentation/visualization suite. It also has facilities for DTI and fMRI processing.

Download Now Download

OR See All Files

Specifications

Category:

Web Resource, Morphology, Volumetric Analysis, Active Contour, Expectation Minimization, Intermodal, Intersubject, Image-to-Template, Fiber Tracking, Animation, Three Dimensional Display, Volume Rendering

License:

GNU General Public License (GPL)

Development Status:

5 - Production/Stable/Mature

Diagnosis:

Depression, Dyslexia, Epilepsy, Multiple Sclerosis, Cocaine-Related Disorders

Domain:

Environment:

Console (Text Based), Win32 (MS Windows), X11 Applications

Intended Audience:

Developers, End Users

Natural Language:

English

Operating System:

MacOS, Windows NT/2000, BSD, IRIX, Linux, SunOS/Solaris

Programming Language:

C++, Tcl/Tk

Supported Data Format:

ANALYZE, MINC2, NIfTI-1

Associations

is a plugin for:

3D Slicer

Recent Activity - Documents

PubMed Mentions documentation

Alternative approach to assessment of bone quality using micro-computed tomography. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

A novel mutation of the fumarase gene in a family with autosomal recessive fumarase deficiency. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Characterization of the metal ion binding site in the anti-terminator protein, HutP, of Bacillus subtilis. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Interethnic differences in muscle, liver and abdominal fat partitioning in obese adolescents. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Gender-specific effects of prenatal and adolescent exposure to tobacco smoke on auditory and visual attention. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Proceedings of the 2006 International Workshop on Multiscale Biological Imaging, Data Mining and Informatics, Santa Barbara, USA (BII06). posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Rapid development of medical imaging tools with open-source libraries. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Sensory and cognitive mechanisms of change detection in the context of speech. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Bioimage informatics: a new area of engineering biology. posted by Nina Preuss on Dec 16, 2017

PubMed Mentions documentation

Image analysis software based on color segmentation for characterization of viability and physiological activity of biofilms. posted by Nina Preuss on Dec 16, 2017

Recent Activity - Forums

open-discussion forum

RE: Generating image for publication [Bioimage suite related] posted by Larry Olson on May 30

open-discussion forum

Generating image for publication [Bioimage suite related] posted by Luis Araujo on May 30

open-discussion forum

RE:Createobjectmapfrom surfaces using mask function posted by jenny on May 9

open-discussion forum

RE:Createobjectmapfrom surfaces using mask function posted by Xenophon Papademetris on May 7

open-discussion forum

RE: Createobjectmapfrom surfaces using mask function posted by jenny on May 7

open-discussion forum

RE: Createobjectmapfrom surfaces using mask function posted by Xenophon Papademetris on May 7

open-discussion forum

RE: Create objectmapfrom surfaces using mask function posted by jenny on May 7

open-discussion forum

Create objectmapfrom surfaces using mask function posted by Xenophon Papademetris on May 5

open-discussion forum

Create objectmap from surfaces using mask function posted by jenny on May 4

open-discussion forum

connectome based predicitve modeling posted by Ralf Veit on Apr 26

Recent Activity - News

Tool & Resource news

BioImage Suite 3.01 is released, forum is moved posted by Xenophon Papademetris on Mar 25, 2011

Tool & Resource news

Programming for Medical Image Analysis with VTK posted by Xenophon Papademetris on Nov 16, 2009

Tool & Resource news

BioImage Suite - Slicer Integration posted by Alark Joshi on Aug 21, 2009

Tool & Resource news

BioImage Suite 2.6b2 Released posted by Alark Joshi on Aug 28, 2008

Tool & Resource news

BioImage Suite 2.6 beta 1 has been released posted by Alark Joshi on Jul 15, 2008

Tool & Resource news

BioImage Suite 2.5RC2 Released/Course to Begin Jan 24th posted by Xenophon Papademetris on Jan 15, 2008

Recent Activity - Files

Functional Brain Atlas from Finn/Shen et al Nature Neuro 2015: 1.0 release

shen_268_parcellation_networklabels.csv posted by Xenophon Papademetris on Nov 6, 2015

Functional Brain Atlas from Finn/Shen et al Nature Neuro 2015: 1.0 release

nn_code.zip posted by Xenophon Papademetris on Nov 6, 2015

Functional Brain Atlas from Finn/Shen et al Nature Neuro 2015: 1.0 release

http://bioimagesuite.yale.edu/ posted by Xenophon Papademetris on Oct 14, 2015

Functional Brain Atlas from Finn/Shen et al Nature Neuro 2015: 1.0 release

shen_1mm_268_parcellation.nii.gz posted by Xenophon Papademetris on Oct 14, 2015

Functional Brain Atlas from Finn/Shen et al Nature Neuro 2015: 1.0 release

shen_2mm_268_parcellation.nii.gz posted by Xenophon Papademetris on Oct 14, 2015

bioimagesuite: Functional Brain Atlas from Shen et al Neuroimage 2013 release

http://www.bioimagesuite.org posted by Xenophon Papademetris on Aug 1, 2013

bioimagesuite: Functional Brain Atlas from Shen et al Neuroimage 2013 release

shenetal_neuroimage2013_funcatlas.zip posted by Xenophon Papademetris on Aug 1, 2013

bioimagesuite: BioImage Suite 3.01 release

BioImage Suite Download page posted by Xenophon Papademetris on Mar 18, 2011

bioimagesuite: BioImage Suite 2.5 release

BioImage Suite 2.5 Release Announcement posted by Xenophon Papademetris on Jan 30, 2008

bioimagesuite: 2.5RC2 release

Release Announcement posted by Xenophon Papademetris on Jan 16, 2008

Members

Admin

Senior Developer

BioImage Suite

Specifications

Associations

Recent Activity - Documents

Recent Activity - Forums

Recent Activity - News

Recent Activity - Files

Statistics more information

Participate!

Reviews & Ratings more information

OVERALL:
INSTALLATION:
DOCUMENTATION: