CBS High-Res Brain Processing Tools

With 7 Tesla MRI, neuroscientists can investigate the structure of the human brain with enhanced resolution, currently up to 350µm isotropic in vivo. Quantitative MR contrasts and increased level of detail within tissues reveal many fine anatomical structures, but require efficient computational methods that handle various contrasts and scale well with data complexity.

The CBS High-Res Brain Processing Tools provide a fully automated processing pipeline for cortical analysis of structural MR images at a resolution of up to 400µm, including skull stripping, whole brain segmentation, cortical extraction, surface inflation and mapping, as well as dedicated tools for profile estimation across the cortical thickness.

The tools are released as a set of plug-ins for the MIPAV software package and the JIST pipeline environment. They are therefore cross-platform and compatible with a wide variety of file formats.
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Specifications

License:Freeware
Domain:MR

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PubMed Mentions documentation

Behavioral effects of cannabinoid agents in animals. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Neurochemical characterization of the cerebellar-recipient motor thalamic territory in the macaque monkey. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

[18F]MK-9470, a positron emission tomography (PET) tracer for in vivo human PET brain imaging of the cannabinoid-1 receptor. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Endocannabinoid system and synaptic plasticity: implications for emotional responses. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Polychlorinated biphenyl congeners in river sediments: distribution and source identification using multivariate factor analysis. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Enhancing social ability by stimulating right temporoparietal junction. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

One abstinence day decreases sperm DNA fragmentation in 90 % of selected patients. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

The efficiency of a donor-recipient program using infertile donors' egg cryo-banking: a Brazilian reality. posted by Nina Preuss on Dec 16, 2017

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RE: memory with run-cbstools-mac posted by Pierre-Louis Bazin on Jul 11, 2017

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cannot change memory with run-cbstools-mac posted by Thomas Ernst on Jul 10, 2017