Automatic Registration Toolbox
ART `acpcdetect' program for automatic detection of the AC and PC landmarks and the mid-sagittal plane on 3D structural MRI scans.
ART `brainwash' program for automatic multi-atlas skull-stripping of 3D structural MRI scans.
ART `3dwarper' program of non-linear inter-subject registration of 3D structural MRI scans.
Software (art2) for linear rigid-body intra-subject inter-modality (MRI-PET) image registration.
Data resource: The ART projects makes available corpus callosum segmentations of 316 normal subjects from the OASIS cross-sectional database
ART `yuki' program for fast, robust, and fully automatic segmentation of the corpus callosum on 3D structural MRI scans.
ART 'kaiba' program: estimates the hippocampal parenchymal fraction (HPF) from 3D T1W MRI.
Execution Options
Specifications
Associations
Recent Activity - Trackers
problems with applywarp3d posted by Christine Zakrzewski on May 27, 2011
-u option for 3dwarper is ignored posted by Christine Zakrzewski on May 27, 2011
-u option for 3dwarper is ignored posted by Babak Ardekani on Aug 4, 2010
-u option for 3dwarper is ignored posted by Don Bigler on Aug 4, 2010
Maintain test cases in passing status posted by Hans Johnson on Feb 6, 2010
Improve code coverage to above 80% posted by Hans Johnson on Feb 6, 2010
Configure output image parameters from command line. posted by Hans Johnson on Feb 6, 2010
Need to add over-ride capabilities to force the correct answer posted by Hans Johnson on Feb 6, 2010
Replace Rigid3DTransform with VersorRigid3DTransform in entire code base posted by Hans Johnson on Apr 17, 2009
Verify building against ITK v. 3.10 or greater posted by Hans Johnson on Apr 17, 2009
Recent Activity - Forums
RE: write out AC and PC coordinates posted by oo m on Nov 8
write out AC and PC coordinates posted by Maxwell Bertolero on Oct 30
using ART2.0 PIL transform posted by Matthieu Faillot on Apr 19
CC subregions MNI space output? posted by Wesley Thomas on Feb 14
RE: Working with the cc subregions posted by Matthieu Faillot on Jun 15, 2022
Cannot open mdl. file posted by Carina Forster on Jan 7, 2021
atra cannot find orion.mdl posted by tom parker on Apr 17, 2020
empty average file after atra posted by valeriarm on Apr 15, 2020
RE: cropped anatomical image after acpcdetect posted by Babak Ardekani on Dec 17, 2019
Recent Activity - News
Automatic Registration Toolbox yuki v2.2 released posted by Babak Ardekani on Nov 4, 2022
acpcdetect v2.0 released posted by Babak Ardekani on Apr 24, 2018
Release of KAIBA Version 3.0 module of ART posted by Babak Ardekani on Feb 6, 2018
Release of Automatic Temporal Registration Algorithm (ATRA) posted by Babak Ardekani on Nov 6, 2017
Release of KAIBA Version 2.0 posted by Babak Ardekani on Aug 25, 2016
KAIBA release posted by Babak Ardekani on Nov 13, 2015
Release of version 2.1 of 'yuki' CC segmentation program posted by Babak Ardekani on Sep 27, 2013
Corpus Callosum Segmentation Software 'yuki' posted by Babak Ardekani on Jan 30, 2013
The ART of Corpus Callosum Segmentation posted by Babak Ardekani on Jan 14, 2013
Release of corpus callosum segmentations from OASIS database posted by Babak Ardekani on Mar 28, 2012
Recent Activity - Files
corpus callosum segmentation software: yuki v2.2 release
yuki_V2.2_LinuxCentOS6.7.tar.gz posted by Babak Ardekani on Nov 2, 2022
corpus callosum segmentation software: yuki v2.2 release
yuki_V2.2_macOS10.12.6.tar.gz posted by Babak Ardekani on Nov 2, 2022
corpus callosum segmentation software: yuki v2.2 release
yuki_documentation.pdf posted by Babak Ardekani on Nov 2, 2022
NeuroLex ID: nlx_151368
Documents: 2
PubMed Mentions: 22
Forums: 211 messages in 2 forums
News Items: 15
Task Manager: 0 open / 0 total
Tracker: 0 open / 0 total
Total Downloads: 14891
Registered: Mar 6, 2008
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