Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19222728
2
CONN : functional connectivity toolbox
2426332
3
1000 Functional Connectomes Project
2065220
4
MRIcron
1446343
5
JIST: Java Image Science Toolkit
895450
6
BrainNet Viewer
734925
7
imcalc: Batch image calulations and transformations for SPM
728864
8
Computational Morphometry Toolkit (CMTK)
673102
9
DTI-TK
643675
10
Vaa3D and Vaa3D-Neuron
625071
11
WFU_PickAtlas
581278
12
SPHARM-PDM Toolbox
499814
13
BioImage Suite
498564
14
Automatic Registration Toolbox
494077
15
MRIcroGL
491172
16
GIFTI
458945
17
IBSR
415844
18
PANDA: a pipeline tool for diffusion MRI
413983
19
ABC (Atlas Based Classification)
398376
20
Artifact Detection Tools (ART)
371640
21
DWI/DTI Quality Control Tool: DTIPrep
345679
22
Diffusional Kurtosis Estimator
318709
23
NIfTI
318255
24
Human Imaging Database (HID)
308812
25
3D Slicer
305432
26
Web Game for Collaborative Labeling
302307
27
The Neuro Bureau
296309
28
BXH/XCEDE Tools
294520
29
SRI24 Atlas: Normal Adult Brain Anatomy
285217
30
TOADS-CRUISE Brain Segmentation Tools
283507
31
BrainVisa Morphologist extensions
282077
32
Functional Imaging BIRN
278008
33
GRETNA
274956
34
IIT Human Brain Atlas (v.5.0)
263632
35
eConnectome
260914
36
HAMMER: Deformable Registration
254553
37
Generalized PPI Toolbox
252059
38
Network-Based Statistic (NBS)
246876
39
ARCTIC
243481
40
Mango
243454
41
fMRI-CPCA
240003
42
FSL
232523
43
Conferences, Workshops and Meetings
231598
44
MRtrix
231588
45
PESTICA & SLOMOCO: physio and motion correction tools
230169
46
Brain Connectivity Toolbox
229815
47
VMTK in 3D Slicer
228010
48
BrainVoyager Brain Tutor
227333
49
NeuroImaging Analysis Kit (NIAK)
226863
50
Hammer And WML Modules for 3D Slicer
225173
51
CANDI Neuroimaging Access Point
224160
52
ITK-SNAP
222424
53
BRAINSTools
222152
54
FiberViewerLight
218968
55
AFNI
218202
56
Talairach Daemon
218047
57
AutoSeg
216529
58
Pipeline system for Octave and Matlab
215915
59
DTIProcess ToolKit
214602
60
SPM
212377
61
Diffusion Toolkit / TrackVis
212136
62
dcm2nii
207351
63
Multi-Modal MRI Reproducibility Resource
206860
64
REX
204556
65
BrainMap Database
200023
66
FBIRN Image Processing Scripts (FIPS)
198432
67
ASHS: Automatic Segmentation of Hippocampal Subfields
195956
68
DICOM_UploadGUI
195903
69
MRI Studio
195668
70
NeuroDebian
194058
71
Spatially Constrained Parcellation
193365
72
SnPM
191977
73
Camino
191809
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
188664
75
SVV
188640
76
Maps4Mipav (Exploratory JIST)
188020
77
DicomBrowser
187946
78
3DSlicerLupusLesionModule
186914
79
R-package for adaptive fMRI analysis
186748
80
xjView, a viewing tool for SPM
186727
81
BrainMask Volume Processing Tool
186724
82
XNAT
186662
83
JIP fMRI Analysis Toolkit
184762
84
Numerical Fibre Generator (NFG)
183553
85
MIView
182990
86
BASH4RfMRI
182798
87
Group ICA Toolbox (GIFT and EEGIFT)
182638
88
Slicer3 Example Modules
182635
89
GTRACT
182411
90
N3 - MINC B0 nonuniformity correction
181658
91
Grantees Meeting for NITRC
181315
92
LONI Debabeler
180955
93
E-Prime
180479
94
FSL extensions
180421
95
FreeSurfer
179579
96
Level-set Segmentation for Slicer3
179367
97
VAMCA Cortical Meta-analysis Toolbox
177778
98
BRAINSFit
177063
99
DTI Fiber Tract Statistics
177011
100
ASL data processing tool box
176351