Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19244314
2
CONN : functional connectivity toolbox
2474860
3
1000 Functional Connectomes Project
2096869
4
MRIcron
1472434
5
JIST: Java Image Science Toolkit
897895
6
BrainNet Viewer
751964
7
imcalc: Batch image calulations and transformations for SPM
730067
8
Computational Morphometry Toolkit (CMTK)
676993
9
DTI-TK
647329
10
Vaa3D and Vaa3D-Neuron
628072
11
WFU_PickAtlas
585756
12
MRIcroGL
517637
13
SPHARM-PDM Toolbox
502209
14
BioImage Suite
501344
15
Automatic Registration Toolbox
496656
16
GIFTI
462033
17
IBSR
419143
18
PANDA: a pipeline tool for diffusion MRI
417851
19
Artifact Detection Tools (ART)
414188
20
ABC (Atlas Based Classification)
399714
21
DWI/DTI Quality Control Tool: DTIPrep
348726
22
NIfTI
321087
23
Diffusional Kurtosis Estimator
320972
24
3D Slicer
313314
25
Human Imaging Database (HID)
310445
26
Web Game for Collaborative Labeling
303017
27
The Neuro Bureau
297680
28
BXH/XCEDE Tools
295961
29
SRI24 Atlas: Normal Adult Brain Anatomy
288211
30
TOADS-CRUISE Brain Segmentation Tools
285009
31
BrainVisa Morphologist extensions
283664
32
Functional Imaging BIRN
281426
33
GRETNA
281091
34
IIT Human Brain Atlas (v.5.0)
266073
35
eConnectome
264454
36
Generalized PPI Toolbox
255240
37
HAMMER: Deformable Registration
255088
38
Network-Based Statistic (NBS)
251860
39
Mango
246734
40
ARCTIC
245287
41
fMRI-CPCA
241695
42
FSL
238725
43
Brain Connectivity Toolbox
233637
44
Conferences, Workshops and Meetings
233403
45
MRtrix
233396
46
PESTICA & SLOMOCO: physio and motion correction tools
231429
47
VMTK in 3D Slicer
229437
48
BrainVoyager Brain Tutor
229151
49
NeuroImaging Analysis Kit (NIAK)
228197
50
Hammer And WML Modules for 3D Slicer
226470
51
CANDI Neuroimaging Access Point
226300
52
ITK-SNAP
226010
53
BRAINSTools
224668
54
AFNI
219822
55
FiberViewerLight
219700
56
Talairach Daemon
219379
57
AutoSeg
218008
58
Pipeline system for Octave and Matlab
216756
59
SPM
215719
60
DTIProcess ToolKit
215456
61
Diffusion Toolkit / TrackVis
214408
62
dcm2nii
212503
63
Multi-Modal MRI Reproducibility Resource
208870
64
REX
206311
65
BrainMap Database
201678
66
FBIRN Image Processing Scripts (FIPS)
199692
67
ASHS: Automatic Segmentation of Hippocampal Subfields
199685
68
MRI Studio
196987
69
NeuroDebian
196600
70
DICOM_UploadGUI
196502
71
Spatially Constrained Parcellation
195548
72
Camino
193414
73
SnPM
193134
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
190731
75
SVV
189229
76
DicomBrowser
189148
77
Maps4Mipav (Exploratory JIST)
188790
78
xjView, a viewing tool for SPM
188308
79
BrainMask Volume Processing Tool
188288
80
XNAT
188111
81
3DSlicerLupusLesionModule
188039
82
R-package for adaptive fMRI analysis
187483
83
JIP fMRI Analysis Toolkit
186384
84
Group ICA Toolbox (GIFT and EEGIFT)
184586
85
Numerical Fibre Generator (NFG)
184333
86
MIView
183850
87
FreeSurfer
183588
88
BASH4RfMRI
183332
89
Slicer3 Example Modules
183326
90
GTRACT
183268
91
N3 - MINC B0 nonuniformity correction
182844
92
E-Prime
182430
93
Grantees Meeting for NITRC
181763
94
LONI Debabeler
181444
95
FSL extensions
180842
96
Surf Ice
180186
97
Level-set Segmentation for Slicer3
180175
98
DTI Fiber Tract Statistics
178736
99
VAMCA Cortical Meta-analysis Toolbox
178554
100
BRAINSFit
178250