Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19271168
2
CONN : functional connectivity toolbox
2599794
3
1000 Functional Connectomes Project
2138828
4
MRIcron
1519094
5
JIST: Java Image Science Toolkit
907540
6
BrainNet Viewer
786903
7
imcalc: Batch image calulations and transformations for SPM
732652
8
Computational Morphometry Toolkit (CMTK)
685824
9
DTI-TK
656498
10
Vaa3D and Vaa3D-Neuron
635818
11
WFU_PickAtlas
595283
12
MRIcroGL
574490
13
SPHARM-PDM Toolbox
510587
14
BioImage Suite
507444
15
Automatic Registration Toolbox
502441
16
GIFTI
469094
17
Artifact Detection Tools (ART)
444072
18
IBSR
427776
19
PANDA: a pipeline tool for diffusion MRI
427084
20
ABC (Atlas Based Classification)
403211
21
DWI/DTI Quality Control Tool: DTIPrep
355225
22
3D Slicer
329455
23
NIfTI
329186
24
Diffusional Kurtosis Estimator
326557
25
Human Imaging Database (HID)
315091
26
Web Game for Collaborative Labeling
305084
27
The Neuro Bureau
301742
28
BXH/XCEDE Tools
299508
29
SRI24 Atlas: Normal Adult Brain Anatomy
296573
30
GRETNA
295548
31
Functional Imaging BIRN
289340
32
TOADS-CRUISE Brain Segmentation Tools
288883
33
BrainVisa Morphologist extensions
286680
34
eConnectome
273598
35
IIT Human Brain Atlas (v.5.0)
272858
36
Generalized PPI Toolbox
264739
37
Network-Based Statistic (NBS)
264005
38
HAMMER: Deformable Registration
256436
39
Mango
254282
40
FSL
250071
41
ARCTIC
248915
42
fMRI-CPCA
245316
43
Brain Connectivity Toolbox
244090
44
MRtrix
239304
45
Conferences, Workshops and Meetings
238399
46
ITK-SNAP
233856
47
PESTICA & SLOMOCO: physio and motion correction tools
233817
48
BrainVoyager Brain Tutor
233085
49
VMTK in 3D Slicer
232984
50
NeuroImaging Analysis Kit (NIAK)
231800
51
CANDI Neuroimaging Access Point
231201
52
Hammer And WML Modules for 3D Slicer
229888
53
BRAINSTools
229882
54
AFNI
224904
55
SPM
222952
56
dcm2nii
222665
57
Talairach Daemon
222065
58
FiberViewerLight
221769
59
AutoSeg
221303
60
Diffusion Toolkit / TrackVis
219298
61
Pipeline system for Octave and Matlab
218731
62
DTIProcess ToolKit
217960
63
Multi-Modal MRI Reproducibility Resource
214608
64
ASHS: Automatic Segmentation of Hippocampal Subfields
209924
65
REX
209685
66
BrainMap Database
205451
67
NeuroDebian
202472
68
FBIRN Image Processing Scripts (FIPS)
202468
69
Surf Ice
201176
70
Spatially Constrained Parcellation
200269
71
MRI Studio
199793
72
DICOM_UploadGUI
198308
73
Camino
197449
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
196053
75
SnPM
195954
76
FreeSurfer
193802
77
DicomBrowser
193282
78
XNAT
191891
79
xjView, a viewing tool for SPM
191782
80
Maps4Mipav (Exploratory JIST)
191682
81
BrainMask Volume Processing Tool
191541
82
3DSlicerLupusLesionModule
191167
83
SVV
190933
84
JIP fMRI Analysis Toolkit
189925
85
R-package for adaptive fMRI analysis
189461
86
Group ICA Toolbox (GIFT and EEGIFT)
189304
87
Numerical Fibre Generator (NFG)
186257
88
E-Prime
186139
89
MIView
185920
90
N3 - MINC B0 nonuniformity correction
185450
91
GTRACT
185378
92
BASH4RfMRI
185142
93
Slicer3 Example Modules
185038
94
Grantees Meeting for NITRC
183043
95
LONI Debabeler
182788
96
DTI Fiber Tract Statistics
182468
97
Level-set Segmentation for Slicer3
182316
98
FSL extensions
182291
99
Human Connectome Project (HCP)
182237
100
BRAINSFit
181630