Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19223429
2
CONN : functional connectivity toolbox
2430768
3
1000 Functional Connectomes Project
2067297
4
MRIcron
1448549
5
JIST: Java Image Science Toolkit
895632
6
BrainNet Viewer
736764
7
imcalc: Batch image calulations and transformations for SPM
728960
8
Computational Morphometry Toolkit (CMTK)
673461
9
DTI-TK
643900
10
Vaa3D and Vaa3D-Neuron
625297
11
WFU_PickAtlas
581766
12
SPHARM-PDM Toolbox
500052
13
BioImage Suite
498791
14
Automatic Registration Toolbox
494320
15
MRIcroGL
493605
16
GIFTI
459293
17
IBSR
416192
18
PANDA: a pipeline tool for diffusion MRI
414407
19
ABC (Atlas Based Classification)
398458
20
Artifact Detection Tools (ART)
377666
21
DWI/DTI Quality Control Tool: DTIPrep
345970
22
Diffusional Kurtosis Estimator
318956
23
NIfTI
318555
24
Human Imaging Database (HID)
308992
25
3D Slicer
305643
26
Web Game for Collaborative Labeling
302360
27
The Neuro Bureau
296394
28
BXH/XCEDE Tools
294639
29
SRI24 Atlas: Normal Adult Brain Anatomy
285458
30
TOADS-CRUISE Brain Segmentation Tools
283653
31
BrainVisa Morphologist extensions
282186
32
Functional Imaging BIRN
278316
33
GRETNA
275589
34
IIT Human Brain Atlas (v.5.0)
263886
35
eConnectome
261300
36
HAMMER: Deformable Registration
254682
37
Generalized PPI Toolbox
252339
38
Network-Based Statistic (NBS)
247451
39
Mango
243706
40
ARCTIC
243568
41
fMRI-CPCA
240267
42
FSL
233018
43
MRtrix
231711
44
Conferences, Workshops and Meetings
231662
45
PESTICA & SLOMOCO: physio and motion correction tools
230375
46
Brain Connectivity Toolbox
230204
47
VMTK in 3D Slicer
228130
48
BrainVoyager Brain Tutor
227483
49
NeuroImaging Analysis Kit (NIAK)
226996
50
Hammer And WML Modules for 3D Slicer
225248
51
CANDI Neuroimaging Access Point
224300
52
ITK-SNAP
222797
53
BRAINSTools
222237
54
FiberViewerLight
219115
55
AFNI
218340
56
Talairach Daemon
218233
57
AutoSeg
216621
58
Pipeline system for Octave and Matlab
215984
59
DTIProcess ToolKit
214673
60
SPM
212652
61
Diffusion Toolkit / TrackVis
212322
62
dcm2nii
207943
63
Multi-Modal MRI Reproducibility Resource
207048
64
REX
204736
65
BrainMap Database
200164
66
FBIRN Image Processing Scripts (FIPS)
198570
67
ASHS: Automatic Segmentation of Hippocampal Subfields
196217
68
DICOM_UploadGUI
195969
69
MRI Studio
195759
70
NeuroDebian
194267
71
Spatially Constrained Parcellation
193464
72
SnPM
192152
73
Camino
191925
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
188837
75
SVV
188694
76
Maps4Mipav (Exploratory JIST)
188113
77
DicomBrowser
188044
78
xjView, a viewing tool for SPM
187056
79
3DSlicerLupusLesionModule
186968
80
R-package for adaptive fMRI analysis
186831
81
XNAT
186815
82
BrainMask Volume Processing Tool
186793
83
JIP fMRI Analysis Toolkit
184859
84
Numerical Fibre Generator (NFG)
183639
85
MIView
183071
86
Group ICA Toolbox (GIFT and EEGIFT)
182863
87
BASH4RfMRI
182840
88
Slicer3 Example Modules
182704
89
GTRACT
182566
90
N3 - MINC B0 nonuniformity correction
181813
91
Grantees Meeting for NITRC
181369
92
LONI Debabeler
181027
93
E-Prime
180669
94
FSL extensions
180446
95
FreeSurfer
179966
96
Level-set Segmentation for Slicer3
179429
97
VAMCA Cortical Meta-analysis Toolbox
177867
98
BRAINSFit
177184
99
DTI Fiber Tract Statistics
177126
100
ASL data processing tool box
176443