Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19230579
2
CONN : functional connectivity toolbox
2451062
3
1000 Functional Connectomes Project
2075908
4
MRIcron
1460403
5
JIST: Java Image Science Toolkit
896672
6
BrainNet Viewer
744615
7
imcalc: Batch image calulations and transformations for SPM
729498
8
Computational Morphometry Toolkit (CMTK)
674818
9
DTI-TK
645323
10
Vaa3D and Vaa3D-Neuron
626393
11
WFU_PickAtlas
583774
12
MRIcroGL
505286
13
SPHARM-PDM Toolbox
501091
14
BioImage Suite
499798
15
Automatic Registration Toolbox
495272
16
GIFTI
460687
17
IBSR
417638
18
PANDA: a pipeline tool for diffusion MRI
416060
19
Artifact Detection Tools (ART)
401114
20
ABC (Atlas Based Classification)
398854
21
DWI/DTI Quality Control Tool: DTIPrep
347144
22
Diffusional Kurtosis Estimator
319901
23
NIfTI
319756
24
Human Imaging Database (HID)
309580
25
3D Slicer
309077
26
Web Game for Collaborative Labeling
302639
27
The Neuro Bureau
296881
28
BXH/XCEDE Tools
295068
29
SRI24 Atlas: Normal Adult Brain Anatomy
286633
30
TOADS-CRUISE Brain Segmentation Tools
284253
31
BrainVisa Morphologist extensions
282799
32
Functional Imaging BIRN
279332
33
GRETNA
278210
34
IIT Human Brain Atlas (v.5.0)
264948
35
eConnectome
262988
36
HAMMER: Deformable Registration
254860
37
Generalized PPI Toolbox
253496
38
Network-Based Statistic (NBS)
249534
39
Mango
244891
40
ARCTIC
244445
41
fMRI-CPCA
240857
42
FSL
235481
43
MRtrix
232394
44
Conferences, Workshops and Meetings
232233
45
Brain Connectivity Toolbox
231806
46
PESTICA & SLOMOCO: physio and motion correction tools
230977
47
VMTK in 3D Slicer
228609
48
BrainVoyager Brain Tutor
228200
49
NeuroImaging Analysis Kit (NIAK)
227516
50
Hammer And WML Modules for 3D Slicer
225661
51
CANDI Neuroimaging Access Point
225012
52
ITK-SNAP
224443
53
BRAINSTools
223185
54
FiberViewerLight
219426
55
AFNI
218978
56
Talairach Daemon
218757
57
AutoSeg
217147
58
Pipeline system for Octave and Matlab
216305
59
DTIProcess ToolKit
215014
60
SPM
214188
61
Diffusion Toolkit / TrackVis
213321
62
dcm2nii
210023
63
Multi-Modal MRI Reproducibility Resource
207902
64
REX
205435
65
BrainMap Database
200734
66
FBIRN Image Processing Scripts (FIPS)
198963
67
ASHS: Automatic Segmentation of Hippocampal Subfields
197747
68
MRI Studio
196317
69
DICOM_UploadGUI
196219
70
NeuroDebian
195135
71
Spatially Constrained Parcellation
194103
72
SnPM
192557
73
Camino
192514
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
189573
75
SVV
188915
76
DicomBrowser
188496
77
Maps4Mipav (Exploratory JIST)
188363
78
xjView, a viewing tool for SPM
187638
79
XNAT
187410
80
3DSlicerLupusLesionModule
187334
81
BrainMask Volume Processing Tool
187251
82
R-package for adaptive fMRI analysis
187171
83
JIP fMRI Analysis Toolkit
185569
84
Numerical Fibre Generator (NFG)
183945
85
Group ICA Toolbox (GIFT and EEGIFT)
183738
86
MIView
183430
87
BASH4RfMRI
183052
88
Slicer3 Example Modules
183010
89
GTRACT
182940
90
N3 - MINC B0 nonuniformity correction
182347
91
FreeSurfer
181676
92
Grantees Meeting for NITRC
181581
93
E-Prime
181402
94
LONI Debabeler
181203
95
FSL extensions
180580
96
Level-set Segmentation for Slicer3
179697
97
VAMCA Cortical Meta-analysis Toolbox
178158
98
DTI Fiber Tract Statistics
177680
99
BRAINSFit
177666
100
ASL data processing tool box
176876