Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19215758
2
CONN : functional connectivity toolbox
2381096
3
1000 Functional Connectomes Project
2055424
4
MRIcron
1421133
5
JIST: Java Image Science Toolkit
894116
6
imcalc: Batch image calulations and transformations for SPM
728171
7
BrainNet Viewer
720194
8
Computational Morphometry Toolkit (CMTK)
669941
9
DTI-TK
641967
10
Vaa3D and Vaa3D-Neuron
623128
11
WFU_PickAtlas
577196
12
SPHARM-PDM Toolbox
497170
13
BioImage Suite
496638
14
Automatic Registration Toolbox
492332
15
MRIcroGL
467083
16
GIFTI
456195
17
IBSR
413073
18
PANDA: a pipeline tool for diffusion MRI
411079
19
ABC (Atlas Based Classification)
397698
20
Artifact Detection Tools (ART)
360592
21
DWI/DTI Quality Control Tool: DTIPrep
344056
22
Diffusional Kurtosis Estimator
316635
23
NIfTI
316277
24
Human Imaging Database (HID)
307842
25
3D Slicer
303699
26
Web Game for Collaborative Labeling
301901
27
The Neuro Bureau
295546
28
BXH/XCEDE Tools
293536
29
SRI24 Atlas: Normal Adult Brain Anatomy
282831
30
TOADS-CRUISE Brain Segmentation Tools
282613
31
BrainVisa Morphologist extensions
281326
32
Functional Imaging BIRN
276490
33
GRETNA
269602
34
IIT Human Brain Atlas (v.5.0)
261488
35
eConnectome
258237
36
HAMMER: Deformable Registration
254087
37
Generalized PPI Toolbox
249629
38
ARCTIC
242840
39
Network-Based Statistic (NBS)
241686
40
Mango
241256
41
fMRI-CPCA
239056
42
Conferences, Workshops and Meetings
231045
43
MRtrix
230354
44
PESTICA & SLOMOCO: physio and motion correction tools
229468
45
FSL
228946
46
VMTK in 3D Slicer
227123
47
BrainVoyager Brain Tutor
226141
48
NeuroImaging Analysis Kit (NIAK)
225790
49
Brain Connectivity Toolbox
225681
50
Hammer And WML Modules for 3D Slicer
224512
51
CANDI Neuroimaging Access Point
222866
52
BRAINSTools
221492
53
ITK-SNAP
218888
54
FiberViewerLight
218450
55
AFNI
217190
56
Talairach Daemon
216981
57
AutoSeg
215715
58
Pipeline system for Octave and Matlab
215412
59
DTIProcess ToolKit
214007
60
Diffusion Toolkit / TrackVis
211033
61
SPM
209864
62
Multi-Modal MRI Reproducibility Resource
204978
63
REX
203156
64
dcm2nii
202856
65
BrainMap Database
199020
66
FBIRN Image Processing Scripts (FIPS)
197955
67
DICOM_UploadGUI
195581
68
MRI Studio
195085
69
ASHS: Automatic Segmentation of Hippocampal Subfields
193369
70
NeuroDebian
192496
71
Spatially Constrained Parcellation
192045
72
SnPM
191344
73
Camino
191040
74
SVV
188301
75
Maps4Mipav (Exploratory JIST)
187694
76
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
187211
77
DicomBrowser
187038
78
3DSlicerLupusLesionModule
186453
79
R-package for adaptive fMRI analysis
186362
80
BrainMask Volume Processing Tool
186268
81
XNAT
185806
82
xjView, a viewing tool for SPM
185501
83
JIP fMRI Analysis Toolkit
183956
84
Numerical Fibre Generator (NFG)
183046
85
BASH4RfMRI
182427
86
MIView
182303
87
Slicer3 Example Modules
182271
88
GTRACT
181957
89
Group ICA Toolbox (GIFT and EEGIFT)
181122
90
Grantees Meeting for NITRC
181013
91
N3 - MINC B0 nonuniformity correction
181011
92
LONI Debabeler
180593
93
FSL extensions
180197
94
E-Prime
179527
95
Level-set Segmentation for Slicer3
179041
96
FreeSurfer
177774
97
VAMCA Cortical Meta-analysis Toolbox
177087
98
BRAINSFit
176278
99
DTI Fiber Tract Statistics
176207
100
ASL data processing tool box
175601