Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19248000
2
CONN : functional connectivity toolbox
2497960
3
1000 Functional Connectomes Project
2109168
4
MRIcron
1483162
5
JIST: Java Image Science Toolkit
899580
6
BrainNet Viewer
759867
7
imcalc: Batch image calulations and transformations for SPM
730649
8
Computational Morphometry Toolkit (CMTK)
678876
9
DTI-TK
649528
10
Vaa3D and Vaa3D-Neuron
629971
11
WFU_PickAtlas
587766
12
MRIcroGL
529162
13
SPHARM-PDM Toolbox
503102
14
BioImage Suite
502611
15
Automatic Registration Toolbox
497756
16
GIFTI
463250
17
Artifact Detection Tools (ART)
424896
18
IBSR
420912
19
PANDA: a pipeline tool for diffusion MRI
419546
20
ABC (Atlas Based Classification)
400413
21
DWI/DTI Quality Control Tool: DTIPrep
350125
22
NIfTI
322468
23
Diffusional Kurtosis Estimator
321991
24
3D Slicer
317957
25
Human Imaging Database (HID)
311303
26
Web Game for Collaborative Labeling
303405
27
The Neuro Bureau
298483
28
BXH/XCEDE Tools
296563
29
SRI24 Atlas: Normal Adult Brain Anatomy
290130
30
TOADS-CRUISE Brain Segmentation Tools
285844
31
BrainVisa Morphologist extensions
284198
32
GRETNA
283871
33
Functional Imaging BIRN
283103
34
IIT Human Brain Atlas (v.5.0)
267239
35
eConnectome
265957
36
Generalized PPI Toolbox
257169
37
HAMMER: Deformable Registration
255295
38
Network-Based Statistic (NBS)
254361
39
Mango
248129
40
ARCTIC
246066
41
fMRI-CPCA
242291
42
FSL
241267
43
Brain Connectivity Toolbox
235695
44
Conferences, Workshops and Meetings
234755
45
MRtrix
234531
46
PESTICA & SLOMOCO: physio and motion correction tools
231858
47
VMTK in 3D Slicer
230251
48
BrainVoyager Brain Tutor
230030
49
NeuroImaging Analysis Kit (NIAK)
228900
50
ITK-SNAP
227439
51
Hammer And WML Modules for 3D Slicer
227163
52
CANDI Neuroimaging Access Point
227072
53
BRAINSTools
225836
54
AFNI
220679
55
FiberViewerLight
219928
56
Talairach Daemon
219842
57
AutoSeg
218540
58
SPM
217483
59
Pipeline system for Octave and Matlab
217116
60
DTIProcess ToolKit
215920
61
Diffusion Toolkit / TrackVis
215370
62
dcm2nii
214863
63
Multi-Modal MRI Reproducibility Resource
209762
64
REX
207059
65
BrainMap Database
202313
66
ASHS: Automatic Segmentation of Hippocampal Subfields
201976
67
FBIRN Image Processing Scripts (FIPS)
200236
68
NeuroDebian
197996
69
MRI Studio
197593
70
DICOM_UploadGUI
196724
71
Spatially Constrained Parcellation
196557
72
Camino
194194
73
SnPM
193699
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
191784
75
DicomBrowser
189817
76
SVV
189552
77
Maps4Mipav (Exploratory JIST)
189369
78
xjView, a viewing tool for SPM
188989
79
BrainMask Volume Processing Tool
188954
80
XNAT
188796
81
3DSlicerLupusLesionModule
188658
82
R-package for adaptive fMRI analysis
187855
83
JIP fMRI Analysis Toolkit
187119
84
Group ICA Toolbox (GIFT and EEGIFT)
185598
85
FreeSurfer
185578
86
Surf Ice
184779
87
Numerical Fibre Generator (NFG)
184662
88
MIView
184199
89
Slicer3 Example Modules
183647
90
BASH4RfMRI
183624
91
GTRACT
183598
92
N3 - MINC B0 nonuniformity correction
183425
93
E-Prime
183245
94
Grantees Meeting for NITRC
181947
95
LONI Debabeler
181679
96
FSL extensions
181050
97
Level-set Segmentation for Slicer3
180680
98
DTI Fiber Tract Statistics
179559
99
VAMCA Cortical Meta-analysis Toolbox
178921
100
Human Connectome Project (HCP)
178877