Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19223354
2
CONN : functional connectivity toolbox
2430480
3
1000 Functional Connectomes Project
2067153
4
MRIcron
1448402
5
JIST: Java Image Science Toolkit
895613
6
BrainNet Viewer
736648
7
imcalc: Batch image calulations and transformations for SPM
728954
8
Computational Morphometry Toolkit (CMTK)
673430
9
DTI-TK
643883
10
Vaa3D and Vaa3D-Neuron
625281
11
WFU_PickAtlas
581731
12
SPHARM-PDM Toolbox
500041
13
BioImage Suite
498783
14
Automatic Registration Toolbox
494308
15
MRIcroGL
493461
16
GIFTI
459258
17
IBSR
416158
18
PANDA: a pipeline tool for diffusion MRI
414376
19
ABC (Atlas Based Classification)
398449
20
Artifact Detection Tools (ART)
377154
21
DWI/DTI Quality Control Tool: DTIPrep
345948
22
Diffusional Kurtosis Estimator
318935
23
NIfTI
318535
24
Human Imaging Database (HID)
308979
25
3D Slicer
305633
26
Web Game for Collaborative Labeling
302357
27
The Neuro Bureau
296389
28
BXH/XCEDE Tools
294636
29
SRI24 Atlas: Normal Adult Brain Anatomy
285435
30
TOADS-CRUISE Brain Segmentation Tools
283639
31
BrainVisa Morphologist extensions
282179
32
Functional Imaging BIRN
278300
33
GRETNA
275526
34
IIT Human Brain Atlas (v.5.0)
263867
35
eConnectome
261251
36
HAMMER: Deformable Registration
254678
37
Generalized PPI Toolbox
252327
38
Network-Based Statistic (NBS)
247426
39
Mango
243682
40
ARCTIC
243562
41
fMRI-CPCA
240242
42
FSL
232991
43
MRtrix
231699
44
Conferences, Workshops and Meetings
231655
45
PESTICA & SLOMOCO: physio and motion correction tools
230357
46
Brain Connectivity Toolbox
230173
47
VMTK in 3D Slicer
228119
48
BrainVoyager Brain Tutor
227473
49
NeuroImaging Analysis Kit (NIAK)
226982
50
Hammer And WML Modules for 3D Slicer
225242
51
CANDI Neuroimaging Access Point
224285
52
ITK-SNAP
222777
53
BRAINSTools
222232
54
FiberViewerLight
219102
55
AFNI
218330
56
Talairach Daemon
218220
57
AutoSeg
216613
58
Pipeline system for Octave and Matlab
215977
59
DTIProcess ToolKit
214667
60
SPM
212632
61
Diffusion Toolkit / TrackVis
212305
62
dcm2nii
207917
63
Multi-Modal MRI Reproducibility Resource
207031
64
REX
204725
65
BrainMap Database
200149
66
FBIRN Image Processing Scripts (FIPS)
198564
67
ASHS: Automatic Segmentation of Hippocampal Subfields
196196
68
DICOM_UploadGUI
195965
69
MRI Studio
195754
70
NeuroDebian
194257
71
Spatially Constrained Parcellation
193453
72
SnPM
192142
73
Camino
191920
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
188826
75
SVV
188692
76
Maps4Mipav (Exploratory JIST)
188110
77
DicomBrowser
188032
78
xjView, a viewing tool for SPM
187044
79
3DSlicerLupusLesionModule
186964
80
R-package for adaptive fMRI analysis
186828
81
XNAT
186803
82
BrainMask Volume Processing Tool
186790
83
JIP fMRI Analysis Toolkit
184849
84
Numerical Fibre Generator (NFG)
183633
85
MIView
183064
86
Group ICA Toolbox (GIFT and EEGIFT)
182847
87
BASH4RfMRI
182834
88
Slicer3 Example Modules
182699
89
GTRACT
182553
90
N3 - MINC B0 nonuniformity correction
181802
91
Grantees Meeting for NITRC
181364
92
LONI Debabeler
181023
93
E-Prime
180650
94
FSL extensions
180445
95
FreeSurfer
179942
96
Level-set Segmentation for Slicer3
179424
97
VAMCA Cortical Meta-analysis Toolbox
177863
98
BRAINSFit
177177
99
DTI Fiber Tract Statistics
177121
100
ASL data processing tool box
176435