Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19221070
2
CONN : functional connectivity toolbox
2403230
3
1000 Functional Connectomes Project
2060601
4
MRIcron
1433656
5
JIST: Java Image Science Toolkit
894757
6
imcalc: Batch image calulations and transformations for SPM
728506
7
BrainNet Viewer
726912
8
Computational Morphometry Toolkit (CMTK)
671392
9
DTI-TK
642733
10
Vaa3D and Vaa3D-Neuron
624141
11
WFU_PickAtlas
579129
12
SPHARM-PDM Toolbox
498843
13
BioImage Suite
497497
14
Automatic Registration Toolbox
493182
15
MRIcroGL
479009
16
GIFTI
457462
17
IBSR
414264
18
PANDA: a pipeline tool for diffusion MRI
412467
19
ABC (Atlas Based Classification)
398003
20
Artifact Detection Tools (ART)
365465
21
DWI/DTI Quality Control Tool: DTIPrep
344748
22
Diffusional Kurtosis Estimator
317580
23
NIfTI
317130
24
Human Imaging Database (HID)
308280
25
3D Slicer
304499
26
Web Game for Collaborative Labeling
302059
27
The Neuro Bureau
295932
28
BXH/XCEDE Tools
293963
29
SRI24 Atlas: Normal Adult Brain Anatomy
284035
30
TOADS-CRUISE Brain Segmentation Tools
283048
31
BrainVisa Morphologist extensions
281623
32
Functional Imaging BIRN
277231
33
GRETNA
271799
34
IIT Human Brain Atlas (v.5.0)
262541
35
eConnectome
259634
36
HAMMER: Deformable Registration
254301
37
Generalized PPI Toolbox
250773
38
Network-Based Statistic (NBS)
244204
39
ARCTIC
243088
40
Mango
242311
41
fMRI-CPCA
239477
42
Conferences, Workshops and Meetings
231324
43
MRtrix
230909
44
FSL
230581
45
PESTICA & SLOMOCO: physio and motion correction tools
229760
46
Brain Connectivity Toolbox
228307
47
VMTK in 3D Slicer
227559
48
BrainVoyager Brain Tutor
226667
49
NeuroImaging Analysis Kit (NIAK)
226245
50
Hammer And WML Modules for 3D Slicer
224801
51
CANDI Neuroimaging Access Point
223552
52
BRAINSTools
221801
53
ITK-SNAP
220528
54
FiberViewerLight
218683
55
AFNI
217620
56
Talairach Daemon
217478
57
AutoSeg
216088
58
Pipeline system for Octave and Matlab
215612
59
DTIProcess ToolKit
214272
60
Diffusion Toolkit / TrackVis
211529
61
SPM
211080
62
Multi-Modal MRI Reproducibility Resource
205845
63
dcm2nii
205141
64
REX
203789
65
BrainMap Database
199461
66
FBIRN Image Processing Scripts (FIPS)
198174
67
DICOM_UploadGUI
195744
68
MRI Studio
195308
69
ASHS: Automatic Segmentation of Hippocampal Subfields
194670
70
NeuroDebian
193240
71
Spatially Constrained Parcellation
192664
72
SnPM
191636
73
Camino
191372
74
SVV
188455
75
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
187873
76
Maps4Mipav (Exploratory JIST)
187812
77
DicomBrowser
187435
78
3DSlicerLupusLesionModule
186646
79
R-package for adaptive fMRI analysis
186537
80
BrainMask Volume Processing Tool
186477
81
XNAT
186211
82
xjView, a viewing tool for SPM
186035
83
JIP fMRI Analysis Toolkit
184340
84
Numerical Fibre Generator (NFG)
183259
85
MIView
182645
86
BASH4RfMRI
182578
87
Slicer3 Example Modules
182427
88
GTRACT
182171
89
Group ICA Toolbox (GIFT and EEGIFT)
181818
90
N3 - MINC B0 nonuniformity correction
181300
91
Grantees Meeting for NITRC
181147
92
LONI Debabeler
180719
93
FSL extensions
180294
94
E-Prime
179922
95
Level-set Segmentation for Slicer3
179177
96
FreeSurfer
178480
97
VAMCA Cortical Meta-analysis Toolbox
177374
98
BRAINSFit
176626
99
DTI Fiber Tract Statistics
176548
100
ASL data processing tool box
175892