Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

View Other Top Categories

Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19265946
2
CONN : functional connectivity toolbox
2572805
3
1000 Functional Connectomes Project
2133505
4
MRIcron
1509515
5
JIST: Java Image Science Toolkit
906246
6
BrainNet Viewer
780358
7
imcalc: Batch image calulations and transformations for SPM
732300
8
Computational Morphometry Toolkit (CMTK)
683863
9
DTI-TK
655440
10
Vaa3D and Vaa3D-Neuron
634760
11
WFU_PickAtlas
593386
12
MRIcroGL
563846
13
SPHARM-PDM Toolbox
509321
14
BioImage Suite
506143
15
Automatic Registration Toolbox
501195
16
GIFTI
467086
17
Artifact Detection Tools (ART)
441694
18
IBSR
425601
19
PANDA: a pipeline tool for diffusion MRI
425286
20
ABC (Atlas Based Classification)
402505
21
DWI/DTI Quality Control Tool: DTIPrep
353728
22
3D Slicer
327771
23
NIfTI
327741
24
Diffusional Kurtosis Estimator
325337
25
Human Imaging Database (HID)
314131
26
Web Game for Collaborative Labeling
304724
27
The Neuro Bureau
300824
28
BXH/XCEDE Tools
298566
29
SRI24 Atlas: Normal Adult Brain Anatomy
295164
30
GRETNA
292967
31
TOADS-CRUISE Brain Segmentation Tools
288185
32
Functional Imaging BIRN
287871
33
BrainVisa Morphologist extensions
285905
34
eConnectome
271776
35
IIT Human Brain Atlas (v.5.0)
271679
36
Generalized PPI Toolbox
263404
37
Network-Based Statistic (NBS)
261921
38
HAMMER: Deformable Registration
256043
39
Mango
252480
40
ARCTIC
248121
41
FSL
248056
42
fMRI-CPCA
244486
43
Brain Connectivity Toolbox
242493
44
MRtrix
238089
45
Conferences, Workshops and Meetings
237834
46
PESTICA & SLOMOCO: physio and motion correction tools
233219
47
VMTK in 3D Slicer
232491
48
ITK-SNAP
232250
49
BrainVoyager Brain Tutor
232214
50
NeuroImaging Analysis Kit (NIAK)
230877
51
CANDI Neuroimaging Access Point
230093
52
Hammer And WML Modules for 3D Slicer
229256
53
BRAINSTools
229070
54
AFNI
223780
55
SPM
221698
56
Talairach Daemon
221430
57
FiberViewerLight
221218
58
dcm2nii
221036
59
AutoSeg
220455
60
Diffusion Toolkit / TrackVis
218466
61
Pipeline system for Octave and Matlab
218174
62
DTIProcess ToolKit
217377
63
Multi-Modal MRI Reproducibility Resource
212957
64
REX
208938
65
ASHS: Automatic Segmentation of Hippocampal Subfields
208156
66
BrainMap Database
204634
67
FBIRN Image Processing Scripts (FIPS)
201910
68
NeuroDebian
201402
69
Spatially Constrained Parcellation
199501
70
MRI Studio
199377
71
DICOM_UploadGUI
197794
72
Surf Ice
197295
73
Camino
196748
74
SnPM
195368
75
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
195024
76
FreeSurfer
192121
77
DicomBrowser
192042
78
xjView, a viewing tool for SPM
191100
79
XNAT
191090
80
Maps4Mipav (Exploratory JIST)
191037
81
BrainMask Volume Processing Tool
190941
82
3DSlicerLupusLesionModule
190605
83
SVV
190515
84
JIP fMRI Analysis Toolkit
189096
85
R-package for adaptive fMRI analysis
189034
86
Group ICA Toolbox (GIFT and EEGIFT)
188312
87
Numerical Fibre Generator (NFG)
185746
88
E-Prime
185475
89
MIView
185474
90
GTRACT
184897
91
N3 - MINC B0 nonuniformity correction
184875
92
BASH4RfMRI
184714
93
Slicer3 Example Modules
184590
94
Grantees Meeting for NITRC
182632
95
LONI Debabeler
182446
96
Level-set Segmentation for Slicer3
181973
97
FSL extensions
181946
98
DTI Fiber Tract Statistics
181831
99
Human Connectome Project (HCP)
181641
100
BRAINSFit
180921