CBICA: PORTR
Pre-Operative and post-Recurrence brain Tumor Registration (PORTR) is a software package designed for determining the optimal deformation between pre-operative and post-recurrence scans by finding the minimum of an energy function, which is based on the concept of symmetric registration.
Some typical applications of PORTR include:
- Mapping post-recurrence scans to pre-operative scans
- Labeling entire brain regions of each scan.
PORTR is implemented as a command-line tool. It is semi-automatic and requires minimal user initializations. Users could use the visual interface called CaPTk to easily make initializations and a script for the execution. As a result, PORTR will output a label map of each scan, a mapping between two scans, etc.
Some typical applications of PORTR include:
- Mapping post-recurrence scans to pre-operative scans
- Labeling entire brain regions of each scan.
PORTR is implemented as a command-line tool. It is semi-automatic and requires minimal user initializations. Users could use the visual interface called CaPTk to easily make initializations and a script for the execution. As a result, PORTR will output a label map of each scan, a mapping between two scans, etc.
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Specifications
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Associations
build requires:
is from the makers of:
CBICA: Brain Anatomy Simulator
CBICA: Brain Tumor Modeling - Coupled Solver
CBICA: Brain Tumor Viewer (BTV)
CBICA: Cancer Imaging Phenomics Toolkit (CaPTk)
CBICA: Chimera
CBICA: COMPARE
CBICA: Confetti
CBICA: DTIDROID
CBICA: Geodesic graph-based segmentation with shape priors (GraSP)
CBICA: GLioma Image SegmenTation and Registration (GLISTR)
CBICA: GONDOLA
CBICA: Identification of Sparse Connectivity Patterns in rsfMRI (SCPLearn)
CBICA: Laboratory for Individualized Breast Radiodensity Assessment (LIBRA)
CBICA: MOE
CBICA: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters (MUSE)
CBICA: Multi Atlas Skull Stripping (MASS)
CBICA: ODVBA
CBICA: PHI Estimator
CBICA: PORTR
CBICA: WMLS (White Matter Lesion Segmentation)
HAMMER: Deformable Registration
PREDiCT
CBICA: Datasets
CBICA: WhiteStripe
CBICA: PREDICT
CBICA: PORTR
CBICA: Brain Tumor Modeling - Coupled Solver
CBICA: Brain Tumor Viewer (BTV)
CBICA: Cancer Imaging Phenomics Toolkit (CaPTk)
CBICA: Chimera
CBICA: COMPARE
CBICA: Confetti
CBICA: DTIDROID
CBICA: Geodesic graph-based segmentation with shape priors (GraSP)
CBICA: GLioma Image SegmenTation and Registration (GLISTR)
CBICA: GONDOLA
CBICA: Identification of Sparse Connectivity Patterns in rsfMRI (SCPLearn)
CBICA: Laboratory for Individualized Breast Radiodensity Assessment (LIBRA)
CBICA: MOE
CBICA: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters (MUSE)
CBICA: Multi Atlas Skull Stripping (MASS)
CBICA: ODVBA
CBICA: PHI Estimator
CBICA: PORTR
CBICA: WMLS (White Matter Lesion Segmentation)
HAMMER: Deformable Registration
PREDiCT
CBICA: Datasets
CBICA: WhiteStripe
CBICA: PREDICT
CBICA: PORTR
works well with:
Recent Activity - Forums
Output for the PORTR posted by YIRAN WEI on Mar 8, 2019
Welcome to Help posted by Sarthak Pati on Feb 17, 2017
Recent Activity - Files
portr-1.0.0.zip posted by Sarthak Pati on Feb 20, 2017