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Neuroimaging Resources Registry

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Neuroimaging Data Repository

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NIfTI

The Neuroimaging Informatics Technology Initiative (NIfTI) and NIfTI Data Format Working Group, creator and maintainer of the NIfTI-1 and NIfTI-2 data formats.

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Associations

has subpart:

GIFTI

is part of:

BRAINSTools
NeuroDebian

images available at:

Stark Cross-Sectional Aging
Magnetic Resonance Angiography Atlas Dataset

is required to build:

dinifti
FreeSurfer
Insight Toolkit
ValMap: simple statistical mapping tool
Mapping population-based structural connectomes

works well with:

Insight Toolkit
PyMVPA
MRIcron
Caret
PyNIfTI
HCP WU-Minn Consortium
Mango
FieldTrip
BRAINSTools
Simulated DW-MRI Brain Data Sets for Quantitative Evaluation of Estimated Fiber Orientations
Papaya
DRAMMS Deformable Image Registration Toolbox
Displacement Field Viewer
Simple Medical Imaging Library Interface (SMILI)
Connectome Workbench
Surf Ice
LORIS

works with:

freesurferformats: R Package For Reading and Writing Neuroimaging File Formats
fsbrain
ciftiTools: Tools for Reading, Writing, Viewing and Manipulating CIFTI Files

Recent Activity - Documents

PubMed Mentions documentation

ResectVol: A tool to automatically segment and characterize lacunas in brain images. posted by NITRC Moderator on Jan 22

PubMed Mentions documentation

A Prospective Single-Center Study of the Effects of Repetitive Transcranial Magnetic Stimulation at 2-Week Follow-Up in 17 Patients with Chronic Orofacial Pain Diagnosed by Infrared Thermography. posted by NITRC Moderator on Jan 22

PubMed Mentions documentation

Uncovering Statistical Links Between Gene Expression and Structural Connectivity Patterns in the Mouse Brain. posted by NITRC Moderator on Dec 18, 2021

PubMed Mentions documentation

Impact of GAN-based lesion-focused medical image super-resolution on the robustness of radiomic features. posted by NITRC Moderator on Dec 18, 2021

PubMed Mentions documentation

Neurobiological substrates of major psychiatry disorders: transdiagnostic associations between white matter abnormalities, neuregulin 1 and clinical manifestation. posted by NITRC Moderator on Nov 13, 2021

PubMed Mentions documentation

Quantitative brain imaging analysis of neurological syndromes associated with anti-GAD antibodies. posted by NITRC Moderator on Nov 13, 2021

PubMed Mentions documentation

COVID-19 identification from volumetric chest CT scans using a progressively resized 3D-CNN incorporating segmentation, augmentation, and class-rebalancing. posted by NITRC Moderator on Nov 13, 2021

PubMed Mentions documentation

Machine deep learning accurately detects endoleak after endovascular abdominal aortic aneurysm repair. posted by NITRC Moderator on Nov 13, 2021

PubMed Mentions documentation

Prediction of the Recurrence of Non-Functioning Pituitary Adenomas Using Preoperative Supra-Intra Sellar Volume and Tumor-Carotid Distance. posted by NITRC Moderator on Nov 13, 2021

PubMed Mentions documentation

Predicting future amyloid biomarkers in dementia patients with machine learning to improve clinical trial patient selection. posted by NITRC Moderator on Nov 13, 2021

Recent Activity - Forums

nifti2_data_format forum

DWI B0 with gradient values posted by elisajulia on Aug 9, 2021

nifti2_data_format forum

RE: creating nifti1 images with library v2? posted by Richard Reynolds on Mar 4, 2021

nifti2_data_format forum

RE: creating nifti1 images with library v2? posted by Jon Clayden on Mar 2, 2021

nifti2_data_format forum

creating nifti1 images with library v2? posted by Alle Meije Wink on Mar 2, 2021

extending_nifti forum

JNIfTI - a JSON/binary JSON based format for storing neuroimaging data posted by Qianqian Fang on Jun 18, 2019

extending_nifti forum

RE: Proposed (minor) update for NIFTI sform values posted by Christopher Markiewicz on Apr 2, 2019

extending_nifti forum

RE: Proposed (minor) update for NIFTI sform values posted by paul taylor on Mar 18, 2019

extending_nifti forum

RE: Proposed (minor) update for NIFTI sform values posted by Guillaume Flandin on Mar 18, 2019

extending_nifti forum

RE: Proposed (minor) update for NIFTI sform values posted by paul taylor on Mar 16, 2019

extending_nifti forum

RE: Proposed (minor) update for NIFTI sform values posted by Mark Jenkinson on Mar 16, 2019

Recent Activity - News

Tool & Resource news

"The Rhyme and the Reason of Data Sharing" SfN Symposium posted by Christian Haselgrove on Oct 15, 2007

Recent Activity - Files

Test Data: Structural release

avg152T1_LR_nifti.nii.gz posted by Christian Haselgrove on Nov 8, 2011

Test Data: Structural release

avg152T1_RL_nifti.nii.gz posted by Christian Haselgrove on Nov 8, 2011

nifticonverter: nifticonverter for BrainVoyager QX release

NIfTI support page for BrainVoyager posted by Hester Breman on Aug 6, 2008

pynifti: 0.20070930.1 release

pynifti-0.20070930.1.win32-py2.5.exe posted by Christian Haselgrove on May 22, 2008

pynifti: 0.20070930.1 release

pynifti_0.20070930.1.orig.tar.gz posted by Christian Haselgrove on May 22, 2008

niftimatlib: niftimatlib-1.0 release

niftimatlib-1.0.tar.gz posted by Christian Haselgrove on May 22, 2008

niftijlib: niftijlib-0.2 release

niftijlib-0.2.tar.gz posted by Christian Haselgrove on May 22, 2008

nifticlib: nifticlib-2.0.0 release

sourceforge.net posted by Richard Reynolds on May 22, 2008