Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19263513
2
CONN : functional connectivity toolbox
2559610
3
1000 Functional Connectomes Project
2131301
4
MRIcron
1505352
5
JIST: Java Image Science Toolkit
904918
6
BrainNet Viewer
777953
7
imcalc: Batch image calulations and transformations for SPM
732106
8
Computational Morphometry Toolkit (CMTK)
683000
9
DTI-TK
655039
10
Vaa3D and Vaa3D-Neuron
634357
11
WFU_PickAtlas
592646
12
MRIcroGL
559261
13
SPHARM-PDM Toolbox
506127
14
BioImage Suite
505712
15
Automatic Registration Toolbox
500686
16
GIFTI
466414
17
Artifact Detection Tools (ART)
440896
18
IBSR
424894
19
PANDA: a pipeline tool for diffusion MRI
424347
20
ABC (Atlas Based Classification)
402170
21
DWI/DTI Quality Control Tool: DTIPrep
353196
22
NIfTI
327130
23
3D Slicer
327092
24
Diffusional Kurtosis Estimator
324777
25
Human Imaging Database (HID)
313702
26
Web Game for Collaborative Labeling
304563
27
The Neuro Bureau
300529
28
BXH/XCEDE Tools
298222
29
SRI24 Atlas: Normal Adult Brain Anatomy
294591
30
GRETNA
291854
31
TOADS-CRUISE Brain Segmentation Tools
287909
32
Functional Imaging BIRN
287305
33
BrainVisa Morphologist extensions
285602
34
IIT Human Brain Atlas (v.5.0)
271078
35
eConnectome
270949
36
Generalized PPI Toolbox
261757
37
Network-Based Statistic (NBS)
261104
38
HAMMER: Deformable Registration
255883
39
Mango
251987
40
ARCTIC
247804
41
FSL
247311
42
fMRI-CPCA
244158
43
Brain Connectivity Toolbox
241879
44
MRtrix
237630
45
Conferences, Workshops and Meetings
237548
46
PESTICA & SLOMOCO: physio and motion correction tools
232965
47
VMTK in 3D Slicer
232260
48
BrainVoyager Brain Tutor
231859
49
ITK-SNAP
231726
50
NeuroImaging Analysis Kit (NIAK)
230527
51
CANDI Neuroimaging Access Point
229630
52
Hammer And WML Modules for 3D Slicer
229029
53
BRAINSTools
228663
54
AFNI
223375
55
SPM
221238
56
Talairach Daemon
221169
57
FiberViewerLight
220950
58
dcm2nii
220275
59
AutoSeg
220105
60
Diffusion Toolkit / TrackVis
218123
61
Pipeline system for Octave and Matlab
217941
62
DTIProcess ToolKit
217128
63
Multi-Modal MRI Reproducibility Resource
212418
64
REX
208623
65
ASHS: Automatic Segmentation of Hippocampal Subfields
207411
66
BrainMap Database
204311
67
FBIRN Image Processing Scripts (FIPS)
201668
68
NeuroDebian
200975
69
Spatially Constrained Parcellation
199170
70
MRI Studio
199149
71
DICOM_UploadGUI
197600
72
Camino
196420
73
Surf Ice
195708
74
SnPM
195084
75
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
194631
76
DicomBrowser
191759
77
FreeSurfer
191527
78
xjView, a viewing tool for SPM
190792
79
XNAT
190772
80
BrainMask Volume Processing Tool
190707
81
Maps4Mipav (Exploratory JIST)
190700
82
3DSlicerLupusLesionModule
190339
83
SVV
190322
84
R-package for adaptive fMRI analysis
188854
85
JIP fMRI Analysis Toolkit
188757
86
Group ICA Toolbox (GIFT and EEGIFT)
187957
87
Numerical Fibre Generator (NFG)
185540
88
MIView
185285
89
E-Prime
185270
90
GTRACT
184664
91
N3 - MINC B0 nonuniformity correction
184634
92
BASH4RfMRI
184535
93
Slicer3 Example Modules
184395
94
Grantees Meeting for NITRC
182489
95
LONI Debabeler
182291
96
Level-set Segmentation for Slicer3
181833
97
FSL extensions
181817
98
DTI Fiber Tract Statistics
181538
99
Human Connectome Project (HCP)
181328
100
BRAINSFit
180442