Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19206941
2
CONN : functional connectivity toolbox
2268660
3
1000 Functional Connectomes Project
2027393
4
MRIcron
1378670
5
JIST: Java Image Science Toolkit
891511
6
imcalc: Batch image calulations and transformations for SPM
726762
7
BrainNet Viewer
693786
8
Computational Morphometry Toolkit (CMTK)
664220
9
DTI-TK
639105
10
Vaa3D and Vaa3D-Neuron
620300
11
WFU_PickAtlas
568998
12
SPHARM-PDM Toolbox
494171
13
BioImage Suite
493365
14
Automatic Registration Toolbox
489633
15
GIFTI
451191
16
MRIcroGL
425178
17
IBSR
407914
18
PANDA: a pipeline tool for diffusion MRI
405330
19
ABC (Atlas Based Classification)
396540
20
Artifact Detection Tools (ART)
352670
21
DWI/DTI Quality Control Tool: DTIPrep
341513
22
Diffusional Kurtosis Estimator
313379
23
NIfTI
313238
24
Human Imaging Database (HID)
306112
25
3D Slicer
301617
26
Web Game for Collaborative Labeling
301254
27
The Neuro Bureau
294262
28
BXH/XCEDE Tools
291795
29
TOADS-CRUISE Brain Segmentation Tools
281090
30
BrainVisa Morphologist extensions
279772
31
SRI24 Atlas: Normal Adult Brain Anatomy
277310
32
Functional Imaging BIRN
273781
33
GRETNA
259835
34
IIT Human Brain Atlas (v.5.0)
258342
35
HAMMER: Deformable Registration
253077
36
eConnectome
252288
37
Generalized PPI Toolbox
246032
38
ARCTIC
241759
39
Mango
237589
40
fMRI-CPCA
237323
41
Network-Based Statistic (NBS)
233806
42
Conferences, Workshops and Meetings
230193
43
MRtrix
228643
44
PESTICA & SLOMOCO: physio and motion correction tools
228196
45
VMTK in 3D Slicer
226021
46
FSL
224200
47
BrainVoyager Brain Tutor
224197
48
NeuroImaging Analysis Kit (NIAK)
223826
49
Hammer And WML Modules for 3D Slicer
223382
50
Brain Connectivity Toolbox
220818
51
BRAINSTools
220324
52
CANDI Neuroimaging Access Point
220309
53
FiberViewerLight
217155
54
AFNI
215627
55
Talairach Daemon
215132
56
Pipeline system for Octave and Matlab
214472
57
AutoSeg
214340
58
ITK-SNAP
214046
59
DTIProcess ToolKit
212684
60
Diffusion Toolkit / TrackVis
209285
61
SPM
207007
62
Multi-Modal MRI Reproducibility Resource
202036
63
REX
200639
64
BrainMap Database
197286
65
FBIRN Image Processing Scripts (FIPS)
196944
66
dcm2nii
195823
67
DICOM_UploadGUI
194798
68
MRI Studio
193894
69
SnPM
190240
70
Camino
189935
71
Spatially Constrained Parcellation
189777
72
ASHS: Automatic Segmentation of Hippocampal Subfields
189255
73
NeuroDebian
188415
74
SVV
187612
75
Maps4Mipav (Exploratory JIST)
187160
76
3DSlicerLupusLesionModule
185602
77
R-package for adaptive fMRI analysis
185553
78
DicomBrowser
185526
79
BrainMask Volume Processing Tool
185254
80
XNAT
184607
81
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
184472
82
xjView, a viewing tool for SPM
183603
83
Numerical Fibre Generator (NFG)
182225
84
JIP fMRI Analysis Toolkit
182211
85
BASH4RfMRI
181744
86
Slicer3 Example Modules
181649
87
MIView
181052
88
GTRACT
181046
89
Grantees Meeting for NITRC
180430
90
LONI Debabeler
179943
91
N3 - MINC B0 nonuniformity correction
179780
92
FSL extensions
179684
93
Group ICA Toolbox (GIFT and EEGIFT)
178536
94
Level-set Segmentation for Slicer3
178497
95
E-Prime
177894
96
VAMCA Cortical Meta-analysis Toolbox
175937
97
FreeSurfer
174976
98
DTI Fiber Tract Statistics
174907
99
BRAINSFit
174726
100
ASL data processing tool box
174228