Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19225432
2
CONN : functional connectivity toolbox
2440400
3
1000 Functional Connectomes Project
2070479
4
MRIcron
1454034
5
JIST: Java Image Science Toolkit
896056
6
BrainNet Viewer
740522
7
imcalc: Batch image calulations and transformations for SPM
729185
8
Computational Morphometry Toolkit (CMTK)
674153
9
DTI-TK
644462
10
Vaa3D and Vaa3D-Neuron
625787
11
WFU_PickAtlas
582722
12
SPHARM-PDM Toolbox
500594
13
BioImage Suite
499284
14
MRIcroGL
499167
15
Automatic Registration Toolbox
494742
16
GIFTI
460045
17
IBSR
416920
18
PANDA: a pipeline tool for diffusion MRI
415264
19
ABC (Atlas Based Classification)
398635
20
Artifact Detection Tools (ART)
390974
21
DWI/DTI Quality Control Tool: DTIPrep
346575
22
Diffusional Kurtosis Estimator
319436
23
NIfTI
319185
24
Human Imaging Database (HID)
309250
25
3D Slicer
307012
26
Web Game for Collaborative Labeling
302492
27
The Neuro Bureau
296608
28
BXH/XCEDE Tools
294836
29
SRI24 Atlas: Normal Adult Brain Anatomy
285949
30
TOADS-CRUISE Brain Segmentation Tools
283928
31
BrainVisa Morphologist extensions
282559
32
Functional Imaging BIRN
278743
33
GRETNA
276865
34
IIT Human Brain Atlas (v.5.0)
264344
35
eConnectome
262303
36
HAMMER: Deformable Registration
254772
37
Generalized PPI Toolbox
252877
38
Network-Based Statistic (NBS)
248519
39
Mango
244225
40
ARCTIC
243918
41
fMRI-CPCA
240571
42
FSL
234005
43
MRtrix
232001
44
Conferences, Workshops and Meetings
231816
45
Brain Connectivity Toolbox
230969
46
PESTICA & SLOMOCO: physio and motion correction tools
230773
47
VMTK in 3D Slicer
228335
48
BrainVoyager Brain Tutor
227820
49
NeuroImaging Analysis Kit (NIAK)
227263
50
Hammer And WML Modules for 3D Slicer
225421
51
CANDI Neuroimaging Access Point
224639
52
ITK-SNAP
223652
53
BRAINSTools
222555
54
FiberViewerLight
219331
55
AFNI
218632
56
Talairach Daemon
218501
57
AutoSeg
216851
58
Pipeline system for Octave and Matlab
216118
59
DTIProcess ToolKit
214838
60
SPM
213350
61
Diffusion Toolkit / TrackVis
212776
62
dcm2nii
208979
63
Multi-Modal MRI Reproducibility Resource
207447
64
REX
205082
65
BrainMap Database
200446
66
FBIRN Image Processing Scripts (FIPS)
198767
67
ASHS: Automatic Segmentation of Hippocampal Subfields
196765
68
DICOM_UploadGUI
196088
69
MRI Studio
195986
70
NeuroDebian
194680
71
Spatially Constrained Parcellation
193738
72
SnPM
192337
73
Camino
192124
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
189185
75
SVV
188794
76
DicomBrowser
188251
77
Maps4Mipav (Exploratory JIST)
188198
78
xjView, a viewing tool for SPM
187363
79
XNAT
187112
80
3DSlicerLupusLesionModule
187104
81
R-package for adaptive fMRI analysis
187003
82
BrainMask Volume Processing Tool
186939
83
JIP fMRI Analysis Toolkit
185157
84
Numerical Fibre Generator (NFG)
183778
85
Group ICA Toolbox (GIFT and EEGIFT)
183287
86
MIView
183268
87
BASH4RfMRI
182920
88
Slicer3 Example Modules
182855
89
GTRACT
182779
90
N3 - MINC B0 nonuniformity correction
182059
91
Grantees Meeting for NITRC
181475
92
LONI Debabeler
181108
93
E-Prime
180975
94
FreeSurfer
180787
95
FSL extensions
180511
96
Level-set Segmentation for Slicer3
179517
97
VAMCA Cortical Meta-analysis Toolbox
178014
98
BRAINSFit
177414
99
DTI Fiber Tract Statistics
177332
100
ASL data processing tool box
176659