Below is a list of the tools and resources that have been viewed directly through NITRC. They are ranked in order starting with the tool/resource that has had its pages viewed the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank
Tool/Resource name
Top Page Views
1
NITRC Community
19248178
2
CONN : functional connectivity toolbox
2498977
3
1000 Functional Connectomes Project
2109447
4
MRIcron
1483563
5
JIST: Java Image Science Toolkit
899639
6
BrainNet Viewer
760218
7
imcalc: Batch image calulations and transformations for SPM
730686
8
Computational Morphometry Toolkit (CMTK)
678945
9
DTI-TK
649623
10
Vaa3D and Vaa3D-Neuron
630052
11
WFU_PickAtlas
587851
12
MRIcroGL
529641
13
SPHARM-PDM Toolbox
503160
14
BioImage Suite
502672
15
Automatic Registration Toolbox
497802
16
GIFTI
463306
17
Artifact Detection Tools (ART)
425095
18
IBSR
420991
19
PANDA: a pipeline tool for diffusion MRI
419626
20
ABC (Atlas Based Classification)
400450
21
DWI/DTI Quality Control Tool: DTIPrep
350177
22
NIfTI
322554
23
Diffusional Kurtosis Estimator
322041
24
3D Slicer
318143
25
Human Imaging Database (HID)
311354
26
Web Game for Collaborative Labeling
303425
27
The Neuro Bureau
298520
28
BXH/XCEDE Tools
296589
29
SRI24 Atlas: Normal Adult Brain Anatomy
290234
30
TOADS-CRUISE Brain Segmentation Tools
285880
31
BrainVisa Morphologist extensions
284218
32
GRETNA
283979
33
Functional Imaging BIRN
283177
34
IIT Human Brain Atlas (v.5.0)
267279
35
eConnectome
266015
36
Generalized PPI Toolbox
257234
37
HAMMER: Deformable Registration
255301
38
Network-Based Statistic (NBS)
254486
39
Mango
248191
40
ARCTIC
246092
41
fMRI-CPCA
242325
42
FSL
241377
43
Brain Connectivity Toolbox
235796
44
Conferences, Workshops and Meetings
234812
45
MRtrix
234591
46
PESTICA & SLOMOCO: physio and motion correction tools
231873
47
VMTK in 3D Slicer
230296
48
BrainVoyager Brain Tutor
230062
49
NeuroImaging Analysis Kit (NIAK)
228929
50
ITK-SNAP
227516
51
Hammer And WML Modules for 3D Slicer
227206
52
CANDI Neuroimaging Access Point
227110
53
BRAINSTools
225890
54
AFNI
220708
55
FiberViewerLight
219943
56
Talairach Daemon
219863
57
AutoSeg
218556
58
SPM
217562
59
Pipeline system for Octave and Matlab
217130
60
DTIProcess ToolKit
215945
61
Diffusion Toolkit / TrackVis
215412
62
dcm2nii
214968
63
Multi-Modal MRI Reproducibility Resource
209793
64
REX
207093
65
BrainMap Database
202343
66
ASHS: Automatic Segmentation of Hippocampal Subfields
202069
67
FBIRN Image Processing Scripts (FIPS)
200257
68
NeuroDebian
198054
69
MRI Studio
197624
70
DICOM_UploadGUI
196734
71
Spatially Constrained Parcellation
196606
72
Camino
194227
73
SnPM
193734
74
GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity
191845
75
DicomBrowser
189849
76
SVV
189565
77
Maps4Mipav (Exploratory JIST)
189390
78
xjView, a viewing tool for SPM
189019
79
BrainMask Volume Processing Tool
188972
80
XNAT
188831
81
3DSlicerLupusLesionModule
188691
82
R-package for adaptive fMRI analysis
187879
83
JIP fMRI Analysis Toolkit
187152
84
FreeSurfer
185664
85
Group ICA Toolbox (GIFT and EEGIFT)
185646
86
Surf Ice
184960
87
Numerical Fibre Generator (NFG)
184681
88
MIView
184214
89
Slicer3 Example Modules
183660
90
BASH4RfMRI
183640
91
GTRACT
183615
92
N3 - MINC B0 nonuniformity correction
183451
93
E-Prime
183283
94
Grantees Meeting for NITRC
181951
95
LONI Debabeler
181690
96
FSL extensions
181065
97
Level-set Segmentation for Slicer3
180701
98
DTI Fiber Tract Statistics
179592
99
VAMCA Cortical Meta-analysis Toolbox
178943
100
Human Connectome Project (HCP)
178919